Stats for family Sillaginidae
Stats for total mtDNA (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
47.7 |
52.3 |
4914 |
2997 |
4332 |
4356 |
7.0 |
Stats for total protein-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
48.1 |
51.9 |
3588 |
1904 |
3130 |
2790 |
7.0 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
39.1 |
60.9 |
211 |
145 |
254 |
300 |
7.0 |
Stats for total tRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
46.5 |
53.5 |
390 |
336 |
376 |
458 |
7.0 |
Stats for total rRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
49.3 |
50.7 |
708 |
612 |
561 |
795 |
7.0 |
Stats for ATP6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
46.9 |
53.1 |
208 |
113 |
208 |
155 |
7.0 |
Stats for ATP8 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
45.2 |
54.8 |
55 |
21 |
51 |
41 |
7.0 |
Stats for COX1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
47.9 |
52.1 |
444 |
299 |
440 |
368 |
7.0 |
Stats for COX2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
46.2 |
53.8 |
194 |
125 |
190 |
182 |
7.0 |
Stats for COX3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
49.1 |
50.9 |
251 |
135 |
215 |
185 |
7.0 |
Stats for CYTB (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
47.1 |
52.9 |
358 |
180 |
329 |
276 |
7.0 |
Stats for ND1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
47.5 |
52.5 |
311 |
152 |
285 |
227 |
7.0 |
Stats for ND2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
52.5 |
47.5 |
374 |
175 |
267 |
230 |
7.0 |
Stats for ND3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
49.3 |
50.7 |
109 |
63 |
112 |
65 |
7.0 |
Stats for ND4 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
47.6 |
52.4 |
433 |
225 |
375 |
350 |
7.0 |
Stats for ND4L (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
51.5 |
48.5 |
100 |
53 |
85 |
59 |
7.0 |
Stats for ND5 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
47.2 |
52.8 |
583 |
285 |
499 |
472 |
7.0 |
Stats for ND6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
48.5 |
51.5 |
171 |
82 |
80 |
189 |
7.0 |
Stats for 12S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
50.8 |
49.2 |
260 |
227 |
192 |
279 |
7.0 |
Stats for 16S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sillago sihama |
48.5 |
51.5 |
448 |
385 |
369 |
516 |
7.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.