Stats for family Bataguridae

Species in family:
Cuora amboinensis
Cuora flavomarginata
Cuora trifasciata
Cyclemys dentata
Mauremys japonica
Mauremys mutica
Notochelys platynota
Sacalia bealei
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Stats for total mtDNA (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.5 - 39.7% 60.3 - 62.5% 4189 - 4405 2079 - 2189 4350 - 4773 5595 - 5840 14.7 - 38.2
Median 39.3% 61.0% 4358 2164 4475 5652 22.1
Average ± stdev 38.9 ± 0.7% 61.1 ± 0.7% 4320 ± 70 2155 ± 34 4504 ± 125 5668 ± 69 23.5 ± 7.7
Coefficient of variation 0.02 0.01 0.02 0.02 0.03 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.42 -0.41 0.63 0.55 -0.15 -0.11 -
Pearson p-value
(two tailed)		 2.99E-01 3.07E-01 9.39E-02 1.56E-01 7.19E-01 7.91E-01 -
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Stats for total protein-coding genes (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 40.7% 59.3 - 61.6% 3062 - 3239 1301 - 1397 3005 - 3171 3721 - 3819 14.7 - 38.2
Median 40.0% 60.4% 3192 1371 3074 3766 22.1
Average ± stdev 39.8 ± 0.8% 60.2 ± 0.8% 3155 ± 65 1363 ± 27 3081 ± 57 3759 ± 29 23.5 ± 7.7
Coefficient of variation 0.02 0.01 0.02 0.02 0.02 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.61 -0.61 0.62 0.42 -0.60 -0.45 -
Pearson p-value
(two tailed)		 1.08E-01 1.10E-01 9.85E-02 2.98E-01 1.14E-01 2.62E-01 -
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Stats for D-loop (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 25.3 - 33.8% 66.2 - 74.7% 183 - 280 116 - 127 309 - 587 296 - 469 14.7 - 38.2
Median 30.1% 72.5% 190 121 460 392 22.1
Average ± stdev 29.0 ± 3.0% 71.0 ± 3.0% 202 ± 30 121 ± 3 431 ± 84 371 ± 51 23.5 ± 7.7
Coefficient of variation 0.10 0.04 0.15 0.03 0.20 0.14 0.33
Pearson correlation
coefficient with log10MLS		 -0.53 0.53 -0.18 0.21 0.31 0.27 -
Pearson p-value
(two tailed)		 1.77E-01 1.77E-01 6.68E-01 6.26E-01 4.62E-01 5.16E-01 -
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Stats for total tRNA-coding genes (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.3 - 38.6% 61.4 - 62.7% 343 - 356 234 - 245 407 - 419 541 - 553 14.7 - 38.2
Median 38.1% 62.4% 347 240 415 549 22.1
Average ± stdev 37.9 ± 0.5% 62.1 ± 0.5% 348 ± 4 239 ± 3 413 ± 4 547 ± 3 23.5 ± 7.7
Coefficient of variation 0.01 0.01 0.01 0.02 0.01 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.70 -0.68 0.31 0.84 -0.61 -0.72 -
Pearson p-value
(two tailed)		 5.14E-02 6.34E-02 4.61E-01 8.47E-03 1.05E-01 4.54E-02 -
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Stats for total rRNA-coding genes (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.0 - 40.9% 59.1 - 61.0% 584 - 617 419 - 436 547 - 578 967 - 992 14.7 - 38.2
Median 40.3% 60.0% 606 430 563 977 22.1
Average ± stdev 40.1 ± 0.7% 59.9 ± 0.7% 600 ± 11 429 ± 5 561 ± 9 978 ± 8 23.5 ± 7.7
Coefficient of variation 0.02 0.01 0.02 0.01 0.02 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.70 -0.70 0.74 0.65 -0.65 -0.49 -
Pearson p-value
(two tailed)		 5.23E-02 5.23E-02 3.62E-02 8.29E-02 7.84E-02 2.13E-01 -
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Stats for ATP6 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 36.7 - 39.0% 61.0 - 63.3% 181 - 201 64 - 73 180 - 203 229 - 237 14.7 - 38.2
Median 37.6% 62.6% 192 68 198 230 22.1
Average ± stdev 37.7 ± 0.9% 62.3 ± 0.9% 189 ± 6 67 ± 2 194 ± 7 231 ± 2 23.5 ± 7.7
Coefficient of variation 0.02 0.01 0.04 0.04 0.04 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.17 -0.17 0.35 -0.48 -0.13 0.02 -
Pearson p-value
(two tailed)		 6.95E-01 6.95E-01 4.00E-01 2.24E-01 7.56E-01 9.55E-01 -
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Stats for ATP8 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 29.1 - 37.5% 62.5 - 70.9% 43 - 50 9 - 15 41 - 60 64 - 74 14.7 - 38.2
Median 35.1% 64.9% 46 13 44 66 22.1
Average ± stdev 34.4 ± 2.7% 65.6 ± 2.7% 46 ± 2 12 ± 1 45 ± 5 66 ± 3 23.5 ± 7.7
Coefficient of variation 0.08 0.04 0.05 0.14 0.13 0.05 0.33
Pearson correlation
coefficient with log10MLS		 0.25 -0.25 -0.22 0.66 -0.20 -0.28 -
Pearson p-value
(two tailed)		 5.52E-01 5.52E-01 5.96E-01 7.68E-02 6.36E-01 4.98E-01 -
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Stats for COX1 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.8 - 42.6% 57.4 - 59.0% 370 - 390 260 - 271 459 - 474 426 - 443 14.7 - 38.2
Median 41.7% 58.4% 380 267 467 436 22.1
Average ± stdev 41.7 ± 0.6% 58.3 ± 0.6% 379 ± 7 265 ± 3 466 ± 4 435 ± 5 23.5 ± 7.7
Coefficient of variation 0.01 0.01 0.02 0.01 0.01 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.91 -0.91 0.68 0.78 -0.84 -0.82 -
Pearson p-value
(two tailed)		 1.48E-03 1.63E-03 6.17E-02 2.37E-02 9.04E-03 1.22E-02 -
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Stats for COX2 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 35.2 - 40.2% 59.8 - 64.8% 150 - 177 86 - 103 182 - 208 228 - 245 14.7 - 38.2
Median 37.8% 63.2% 167 92 195 239 22.1
Average ± stdev 37.4 ± 1.5% 62.6 ± 1.5% 165 ± 8 92 ± 4 192 ± 7 238 ± 4 23.5 ± 7.7
Coefficient of variation 0.04 0.02 0.05 0.05 0.04 0.02 0.33
Pearson correlation
coefficient with log10MLS		 0.52 -0.50 0.23 0.64 -0.31 -0.59 -
Pearson p-value
(two tailed)		 1.90E-01 2.02E-01 5.83E-01 8.59E-02 4.49E-01 1.26E-01 -
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Stats for COX3 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.4 - 42.8% 57.2 - 59.6% 199 - 215 115 - 121 212 - 229 237 - 242 14.7 - 38.2
Median 41.7% 58.4% 209 118 218 239 22.1
Average ± stdev 41.6 ± 0.8% 58.4 ± 0.8% 207 ± 4 118 ± 1 219 ± 5 238 ± 1 23.5 ± 7.7
Coefficient of variation 0.02 0.01 0.02 0.02 0.02 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.24 -0.24 0.16 0.36 -0.24 -0.07 -
Pearson p-value
(two tailed)		 5.66E-01 5.66E-01 6.97E-01 3.88E-01 5.64E-01 8.66E-01 -
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Stats for CYTB (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.6 - 43.9% 56.1 - 58.4% 341 - 367 133 - 140 300 - 323 338 - 350 14.7 - 38.2
Median 43.3% 57.8% 360 136 318 344 22.1
Average ± stdev 42.8 ± 0.9% 57.2 ± 0.9% 353 ± 10 135 ± 2 310 ± 9 343 ± 4 23.5 ± 7.7
Coefficient of variation 0.02 0.02 0.03 0.02 0.03 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.48 -0.48 0.40 0.23 -0.29 -0.43 -
Pearson p-value
(two tailed)		 2.29E-01 2.29E-01 3.20E-01 5.85E-01 4.85E-01 2.89E-01 -
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Stats for ND1 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.6 - 40.9% 59.1 - 62.4% 261 - 283 99 - 115 272 - 283 302 - 331 14.7 - 38.2
Median 39.1% 61.0% 275 109 274 315 22.1
Average ± stdev 39.3 ± 1.1% 60.7 ± 1.1% 273 ± 7 108 ± 5 274 ± 3 314 ± 8 23.5 ± 7.7
Coefficient of variation 0.03 0.02 0.03 0.05 0.01 0.03 0.33
Pearson correlation
coefficient with log10MLS		 0.73 -0.73 0.87 0.19 -0.54 -0.55 -
Pearson p-value
(two tailed)		 4.16E-02 4.16E-02 5.20E-03 6.46E-01 1.64E-01 1.55E-01 -
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Stats for ND2 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.1 - 40.6% 59.4 - 62.9% 292 - 315 93 - 123 246 - 268 371 - 386 14.7 - 38.2
Median 39.3% 60.7% 308 102 254 377 22.1
Average ± stdev 39.3 ± 1.1% 60.7 ± 1.1% 305 ± 7 102 ± 8 254 ± 6 377 ± 4 23.5 ± 7.7
Coefficient of variation 0.03 0.02 0.02 0.08 0.02 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.37 -0.37 0.62 -0.09 -0.47 -0.18 -
Pearson p-value
(two tailed)		 3.73E-01 3.73E-01 1.00E-01 8.36E-01 2.43E-01 6.71E-01 -
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Stats for ND3 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 33.8 - 38.3% 61.7 - 66.2% 79 - 94 37 - 40 107 - 121 109 - 115 14.7 - 38.2
Median 37.1% 63.0% 92 39 108 112 22.1
Average ± stdev 36.8 ± 1.6% 63.2 ± 1.6% 89 ± 4 38 ± 1 109 ± 4 111 ± 2 23.5 ± 7.7
Coefficient of variation 0.04 0.03 0.05 0.03 0.04 0.02 0.33
Pearson correlation
coefficient with log10MLS		 0.39 -0.39 0.47 -0.20 -0.58 0.31 -
Pearson p-value
(two tailed)		 3.39E-01 3.39E-01 2.41E-01 6.43E-01 1.29E-01 4.62E-01 -
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Stats for ND4 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.2 - 40.8% 59.2 - 62.8% 364 - 402 148 - 168 354 - 394 458 - 474 14.7 - 38.2
Median 39.7% 60.7% 381 166 372 465 22.1
Average ± stdev 39.4 ± 1.1% 60.6 ± 1.1% 380 ± 12 162 ± 7 369 ± 11 465 ± 5 23.5 ± 7.7
Coefficient of variation 0.03 0.02 0.03 0.05 0.03 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.43 -0.43 0.69 -0.15 -0.61 0.48 -
Pearson p-value
(two tailed)		 2.93E-01 2.93E-01 5.83E-02 7.22E-01 1.11E-01 2.29E-01 -
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Stats for ND4L (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.7 - 42.7% 57.3 - 62.3% 80 - 95 31 - 39 86 - 97 83 - 90 14.7 - 38.2
Median 41.3% 58.7% 87 37 93 85 22.1
Average ± stdev 40.9 ± 1.7% 59.1 ± 1.7% 87 ± 4 35 ± 2 91 ± 4 85 ± 2 23.5 ± 7.7
Coefficient of variation 0.04 0.03 0.05 0.08 0.04 0.03 0.33
Pearson correlation
coefficient with log10MLS		 0.46 -0.46 0.02 0.74 -0.11 -0.76 -
Pearson p-value
(two tailed)		 2.51E-01 2.51E-01 9.63E-01 3.46E-02 7.91E-01 3.01E-02 -
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Stats for ND5 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.5 - 40.3% 59.7 - 62.5% 502 - 543 176 - 191 464 - 495 607 - 635 14.7 - 38.2
Median 39.0% 61.0% 525 185 484 618 22.1
Average ± stdev 39.1 ± 0.9% 60.9 ± 0.9% 522 ± 12 183 ± 4 482 ± 10 618 ± 7 23.5 ± 7.7
Coefficient of variation 0.02 0.01 0.02 0.02 0.02 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.63 -0.63 0.47 0.80 -0.64 -0.31 -
Pearson p-value
(two tailed)		 9.71E-02 9.71E-02 2.44E-01 1.60E-02 8.78E-02 4.55E-01 -
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Stats for ND6 (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.1 - 39.6% 60.4 - 62.9% 150 - 165 39 - 48 73 - 86 234 - 250 14.7 - 38.2
Median 38.7% 61.7% 159 43 79 247 22.1
Average ± stdev 38.5 ± 0.9% 61.5 ± 0.9% 158 ± 4 43 ± 2 77 ± 4 245 ± 4 23.5 ± 7.7
Coefficient of variation 0.02 0.01 0.03 0.06 0.05 0.02 0.33
Pearson correlation
coefficient with log10MLS		 -0.22 0.22 -0.25 0.07 -0.24 0.44 -
Pearson p-value
(two tailed)		 6.01E-01 6.01E-01 5.46E-01 8.78E-01 5.67E-01 2.70E-01 -
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Stats for 12S rRNA gene (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.9 - 42.6% 57.4 - 60.1% 224 - 243 160 - 169 204 - 223 351 - 359 14.7 - 38.2
Median 41.0% 59.0% 234 164 216 356 22.1
Average ± stdev 41.2 ± 0.8% 58.8 ± 0.8% 234 ± 5 164 ± 2 214 ± 5 354 ± 2 23.5 ± 7.7
Coefficient of variation 0.02 0.01 0.02 0.02 0.02 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.70 -0.70 0.67 0.69 -0.63 -0.63 -
Pearson p-value
(two tailed)		 5.46E-02 5.46E-02 6.81E-02 6.08E-02 9.64E-02 9.35E-02 -
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Stats for 16S rRNA gene (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 40.3% 59.7 - 61.6% 355 - 378 259 - 270 340 - 355 611 - 637 14.7 - 38.2
Median 39.5% 60.5% 370 267 347 624 22.1
Average ± stdev 39.4 ± 0.8% 60.6 ± 0.8% 366 ± 8 265 ± 3 346 ± 5 623 ± 8 23.5 ± 7.7
Coefficient of variation 0.02 0.01 0.02 0.01 0.02 0.01 0.33
Pearson correlation
coefficient with log10MLS		 0.52 -0.52 0.61 0.41 -0.51 -0.29 -
Pearson p-value
(two tailed)		 1.89E-01 1.89E-01 1.07E-01 3.11E-01 1.95E-01 4.91E-01 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.