Stats for family Rallidae
Stats for total mtDNA (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
44.8 |
55.2 |
5361 |
2270 |
3948 |
5450 |
20.6 |
Gallinula chloropus |
44.6 |
55.4 |
5329 |
2273 |
3960 |
5465 |
18.6 |
Stats for total protein-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
45.4 |
54.6 |
3455 |
1179 |
2325 |
3245 |
20.6 |
Gallinula chloropus |
45.3 |
54.7 |
3819 |
1314 |
2616 |
3594 |
18.6 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
41.6 |
58.4 |
409 |
219 |
420 |
462 |
20.6 |
Stats for total tRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
41.9 |
58.1 |
389 |
259 |
385 |
512 |
20.6 |
Gallinula chloropus |
41.6 |
58.4 |
387 |
256 |
389 |
513 |
18.6 |
Stats for total rRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
45.6 |
54.4 |
687 |
475 |
525 |
863 |
20.6 |
Gallinula chloropus |
45.0 |
55.0 |
682 |
465 |
530 |
872 |
18.6 |
Stats for ATP6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
46.6 |
53.4 |
258 |
61 |
158 |
207 |
20.6 |
Gallinula chloropus |
44.9 |
55.1 |
246 |
61 |
170 |
207 |
18.6 |
Stats for ATP8 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
42.9 |
57.1 |
64 |
8 |
32 |
64 |
20.6 |
Gallinula chloropus |
37.5 |
62.5 |
54 |
9 |
44 |
61 |
18.6 |
Stats for COX1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
47.2 |
52.8 |
490 |
242 |
381 |
438 |
20.6 |
Gallinula chloropus |
47.8 |
52.2 |
494 |
246 |
369 |
439 |
18.6 |
Stats for COX2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
44.2 |
55.8 |
210 |
92 |
169 |
213 |
20.6 |
Gallinula chloropus |
44.0 |
56.0 |
211 |
90 |
164 |
219 |
18.6 |
Stats for COX3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
46.9 |
53.1 |
255 |
113 |
196 |
220 |
20.6 |
Gallinula chloropus |
45.4 |
54.6 |
244 |
112 |
207 |
221 |
18.6 |
Stats for CYTB (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Gallinula chloropus |
46.5 |
53.5 |
394 |
137 |
271 |
341 |
18.6 |
Stats for ND1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
43.6 |
56.4 |
307 |
112 |
243 |
298 |
20.6 |
Gallinula chloropus |
43.8 |
56.3 |
304 |
116 |
249 |
291 |
18.6 |
Stats for ND2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
43.5 |
56.5 |
361 |
91 |
241 |
347 |
20.6 |
Gallinula chloropus |
44.3 |
55.7 |
363 |
98 |
237 |
342 |
18.6 |
Stats for ND3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
44.6 |
55.4 |
116 |
41 |
96 |
99 |
20.6 |
Gallinula chloropus |
46.3 |
53.7 |
123 |
40 |
88 |
101 |
18.6 |
Stats for ND4 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
44.4 |
55.6 |
472 |
136 |
297 |
463 |
20.6 |
Gallinula chloropus |
44.9 |
55.1 |
477 |
137 |
297 |
457 |
18.6 |
Stats for ND4L (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
46.5 |
53.5 |
99 |
39 |
68 |
91 |
20.6 |
Gallinula chloropus |
46.5 |
53.5 |
101 |
37 |
66 |
93 |
18.6 |
Stats for ND5 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
45.3 |
54.7 |
622 |
199 |
398 |
593 |
20.6 |
Gallinula chloropus |
44.3 |
55.7 |
613 |
190 |
401 |
607 |
18.6 |
Stats for ND6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
47.9 |
52.1 |
203 |
47 |
51 |
221 |
20.6 |
Gallinula chloropus |
46.2 |
53.8 |
198 |
43 |
57 |
224 |
18.6 |
Stats for 12S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
48.6 |
51.4 |
281 |
191 |
189 |
311 |
20.6 |
Gallinula chloropus |
47.4 |
52.6 |
279 |
180 |
189 |
321 |
18.6 |
Stats for 16S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Fulica atra |
43.7 |
56.3 |
406 |
284 |
336 |
552 |
20.6 |
Gallinula chloropus |
43.5 |
56.5 |
403 |
285 |
341 |
551 |
18.6 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.