Stats for family Sciaenidae
Stats for total mtDNA (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
47.1 |
52.9 |
5069 |
2697 |
4202 |
4532 |
50.0 |
Argyrosomus japonicus |
47.7 |
52.3 |
5117 |
2754 |
4172 |
4453 |
30.0 |
Stats for total protein-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
48.0 |
52.0 |
3787 |
1698 |
3002 |
2929 |
50.0 |
Argyrosomus japonicus |
48.8 |
51.2 |
3823 |
1748 |
2980 |
2862 |
30.0 |
Stats for D-loop (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
38.3 |
61.7 |
193 |
131 |
245 |
276 |
50.0 |
Argyrosomus japonicus |
37.3 |
62.7 |
183 |
125 |
252 |
265 |
30.0 |
Stats for total tRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
45.4 |
54.6 |
386 |
308 |
376 |
458 |
50.0 |
Argyrosomus japonicus |
45.4 |
54.6 |
388 |
316 |
376 |
470 |
30.0 |
Stats for total rRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
46.3 |
53.7 |
679 |
545 |
567 |
854 |
50.0 |
Argyrosomus japonicus |
47.4 |
52.6 |
698 |
554 |
548 |
842 |
30.0 |
Stats for ATP6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
49.0 |
51.0 |
245 |
90 |
185 |
164 |
50.0 |
Argyrosomus japonicus |
49.0 |
51.0 |
239 |
96 |
188 |
161 |
30.0 |
Stats for ATP8 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
42.3 |
57.7 |
52 |
19 |
41 |
56 |
50.0 |
Argyrosomus japonicus |
42.9 |
57.1 |
53 |
19 |
40 |
56 |
30.0 |
Stats for COX1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
46.8 |
53.2 |
440 |
289 |
447 |
381 |
50.0 |
Argyrosomus japonicus |
49.2 |
50.8 |
460 |
306 |
435 |
356 |
30.0 |
Stats for COX2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
45.8 |
54.2 |
208 |
110 |
189 |
187 |
50.0 |
Argyrosomus japonicus |
45.3 |
54.7 |
200 |
113 |
191 |
187 |
30.0 |
Stats for COX3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
48.5 |
51.5 |
252 |
129 |
216 |
188 |
50.0 |
Argyrosomus japonicus |
48.0 |
52.0 |
251 |
126 |
219 |
189 |
30.0 |
Stats for CYTB (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
48.9 |
51.1 |
386 |
172 |
314 |
269 |
50.0 |
Argyrosomus japonicus |
50.6 |
49.4 |
396 |
181 |
312 |
252 |
30.0 |
Stats for ND1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
49.0 |
51.0 |
325 |
153 |
272 |
225 |
50.0 |
Argyrosomus japonicus |
49.0 |
51.0 |
325 |
153 |
272 |
225 |
30.0 |
Stats for ND2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
49.6 |
50.4 |
397 |
122 |
250 |
277 |
50.0 |
Argyrosomus japonicus |
48.5 |
51.5 |
377 |
130 |
268 |
271 |
30.0 |
Stats for ND3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
47.9 |
52.1 |
115 |
52 |
107 |
75 |
50.0 |
Argyrosomus japonicus |
52.1 |
47.9 |
122 |
60 |
101 |
66 |
30.0 |
Stats for ND4 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
50.0 |
50.0 |
483 |
208 |
340 |
350 |
50.0 |
Argyrosomus japonicus |
49.7 |
50.3 |
478 |
208 |
348 |
347 |
30.0 |
Stats for ND4L (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
50.5 |
49.5 |
105 |
45 |
82 |
65 |
50.0 |
Argyrosomus japonicus |
53.2 |
46.8 |
116 |
42 |
75 |
64 |
30.0 |
Stats for ND5 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
46.0 |
54.0 |
601 |
245 |
493 |
500 |
50.0 |
Argyrosomus japonicus |
47.3 |
52.7 |
625 |
245 |
468 |
501 |
30.0 |
Stats for ND6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
47.3 |
52.7 |
180 |
67 |
73 |
202 |
50.0 |
Argyrosomus japonicus |
48.9 |
51.1 |
183 |
72 |
70 |
197 |
30.0 |
Stats for 12S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
46.7 |
53.3 |
237 |
206 |
208 |
297 |
50.0 |
Argyrosomus japonicus |
48.4 |
51.6 |
248 |
211 |
198 |
291 |
30.0 |
Stats for 16S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Sciaenops ocellatus |
46.0 |
54.0 |
442 |
339 |
359 |
557 |
50.0 |
Argyrosomus japonicus |
46.8 |
53.2 |
450 |
343 |
350 |
551 |
30.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.