Stats for family Cheloniidae

Species in family:
Stats for total mtDNA (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 39.4 60.6 4539 1969 4150 5839 75.0
Caretta caretta 38.5 60.9 4451 1990 4310 5886 37.0
Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 40.1 59.9 3360 1189 2872 3937 75.0
Caretta caretta 39.6 60.4 3293 1206 2919 3929 37.0
Stats for D-loop (group size: 1 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Caretta caretta 25.6 66.3 198 118 415 403 37.0
Stats for total tRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 38.7 61.3 365 234 392 558 75.0
Caretta caretta 39.4 60.6 369 240 387 550 37.0
Stats for total rRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 39.8 60.2 602 426 566 987 75.0
Caretta caretta 39.0 61.0 582 424 579 996 37.0
Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 40.1 59.9 219 55 170 239 75.0
Caretta caretta 37.7 62.3 204 53 186 239 37.0
Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 34.9 65.1 57 8 46 75 75.0
Caretta caretta 35.8 64.2 51 8 38 68 37.0
Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 41.9 58.1 412 237 433 466 75.0
Caretta caretta 41.6 58.4 407 237 436 468 37.0
Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 39.2 60.8 187 82 167 251 75.0
Caretta caretta 37.1 62.9 170 85 182 250 37.0
Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 42.9 57.1 225 111 201 247 75.0
Caretta caretta 41.8 58.2 215 113 208 248 37.0
Stats for CYTB (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 42.8 57.2 359 131 293 361 75.0
Caretta caretta 43.4 56.6 369 127 279 369 37.0
Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 40.1 59.9 289 100 262 320 75.0
Caretta caretta 39.9 60.1 284 102 262 319 37.0
Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 38.6 61.4 324 77 245 393 75.0
Caretta caretta 38.8 61.2 322 82 249 389 37.0
Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 40.3 59.7 105 36 95 114 75.0
Caretta caretta 38.3 61.7 99 35 101 115 37.0
Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 37.6 62.4 391 128 366 496 75.0
Caretta caretta 36.6 63.4 378 128 377 498 37.0
Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 40.1 59.9 91 28 87 91 75.0
Caretta caretta 39.4 60.6 89 28 86 94 37.0
Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 39.4 60.6 548 163 438 657 75.0
Caretta caretta 40.0 60.0 548 171 439 639 37.0
Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 38.1 61.9 164 36 81 244 75.0
Caretta caretta 38.3 61.7 162 39 81 243 37.0
Stats for 12S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 41.9 58.1 242 164 207 356 75.0
Caretta caretta 41.6 58.4 241 163 205 361 37.0
Stats for 16S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Chelonia mydas 38.6 61.4 360 262 359 631 75.0
Caretta caretta 37.4 62.6 341 261 374 635 37.0

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.