Stats for family Cheloniidae
Stats for total mtDNA (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
39.4 |
60.6 |
4539 |
1969 |
4150 |
5839 |
75.0 |
Caretta caretta |
38.5 |
60.9 |
4451 |
1990 |
4310 |
5886 |
37.0 |
Stats for total protein-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
40.1 |
59.9 |
3360 |
1189 |
2872 |
3937 |
75.0 |
Caretta caretta |
39.6 |
60.4 |
3293 |
1206 |
2919 |
3929 |
37.0 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Caretta caretta |
25.6 |
66.3 |
198 |
118 |
415 |
403 |
37.0 |
Stats for total tRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
38.7 |
61.3 |
365 |
234 |
392 |
558 |
75.0 |
Caretta caretta |
39.4 |
60.6 |
369 |
240 |
387 |
550 |
37.0 |
Stats for total rRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
39.8 |
60.2 |
602 |
426 |
566 |
987 |
75.0 |
Caretta caretta |
39.0 |
61.0 |
582 |
424 |
579 |
996 |
37.0 |
Stats for ATP6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
40.1 |
59.9 |
219 |
55 |
170 |
239 |
75.0 |
Caretta caretta |
37.7 |
62.3 |
204 |
53 |
186 |
239 |
37.0 |
Stats for ATP8 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
34.9 |
65.1 |
57 |
8 |
46 |
75 |
75.0 |
Caretta caretta |
35.8 |
64.2 |
51 |
8 |
38 |
68 |
37.0 |
Stats for COX1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
41.9 |
58.1 |
412 |
237 |
433 |
466 |
75.0 |
Caretta caretta |
41.6 |
58.4 |
407 |
237 |
436 |
468 |
37.0 |
Stats for COX2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
39.2 |
60.8 |
187 |
82 |
167 |
251 |
75.0 |
Caretta caretta |
37.1 |
62.9 |
170 |
85 |
182 |
250 |
37.0 |
Stats for COX3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
42.9 |
57.1 |
225 |
111 |
201 |
247 |
75.0 |
Caretta caretta |
41.8 |
58.2 |
215 |
113 |
208 |
248 |
37.0 |
Stats for CYTB (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
42.8 |
57.2 |
359 |
131 |
293 |
361 |
75.0 |
Caretta caretta |
43.4 |
56.6 |
369 |
127 |
279 |
369 |
37.0 |
Stats for ND1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
40.1 |
59.9 |
289 |
100 |
262 |
320 |
75.0 |
Caretta caretta |
39.9 |
60.1 |
284 |
102 |
262 |
319 |
37.0 |
Stats for ND2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
38.6 |
61.4 |
324 |
77 |
245 |
393 |
75.0 |
Caretta caretta |
38.8 |
61.2 |
322 |
82 |
249 |
389 |
37.0 |
Stats for ND3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
40.3 |
59.7 |
105 |
36 |
95 |
114 |
75.0 |
Caretta caretta |
38.3 |
61.7 |
99 |
35 |
101 |
115 |
37.0 |
Stats for ND4 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
37.6 |
62.4 |
391 |
128 |
366 |
496 |
75.0 |
Caretta caretta |
36.6 |
63.4 |
378 |
128 |
377 |
498 |
37.0 |
Stats for ND4L (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
40.1 |
59.9 |
91 |
28 |
87 |
91 |
75.0 |
Caretta caretta |
39.4 |
60.6 |
89 |
28 |
86 |
94 |
37.0 |
Stats for ND5 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
39.4 |
60.6 |
548 |
163 |
438 |
657 |
75.0 |
Caretta caretta |
40.0 |
60.0 |
548 |
171 |
439 |
639 |
37.0 |
Stats for ND6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
38.1 |
61.9 |
164 |
36 |
81 |
244 |
75.0 |
Caretta caretta |
38.3 |
61.7 |
162 |
39 |
81 |
243 |
37.0 |
Stats for 12S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
41.9 |
58.1 |
242 |
164 |
207 |
356 |
75.0 |
Caretta caretta |
41.6 |
58.4 |
241 |
163 |
205 |
361 |
37.0 |
Stats for 16S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Chelonia mydas |
38.6 |
61.4 |
360 |
262 |
359 |
631 |
75.0 |
Caretta caretta |
37.4 |
62.6 |
341 |
261 |
374 |
635 |
37.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.