Stats for family Viperidae
Species in family:
| Stats for total mtDNA (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 39.6 | 60.4 | 4698 | 2114 | 4657 | 5751 | 11.4 |
| Ovophis okinavensis | 41.8 | 58.2 | 5087 | 2185 | 4450 | 5666 | 19.0 |
| Agkistrodon piscivorus | 42.3 | 57.7 | 5041 | 2237 | 4333 | 5602 | 24.5 |
| Daboia russellii | 39.2 | 60.8 | 4687 | 2075 | 4858 | 5626 | 15.0 |
| Crotalus horridus | 42.9 | 57.1 | 5092 | 2313 | 4286 | 5569 | 30.2 |
| Stats for total protein-coding genes (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 39.8 | 60.2 | 3251 | 1236 | 3015 | 3782 | 11.4 |
| Ovophis okinavensis | 42.6 | 57.4 | 3520 | 1262 | 2806 | 3633 | 19.0 |
| Agkistrodon piscivorus | 43.0 | 57.0 | 3523 | 1306 | 2728 | 3662 | 24.5 |
| Daboia russellii | 39.1 | 60.9 | 3202 | 1208 | 3200 | 3664 | 15.0 |
| Crotalus horridus | 43.6 | 56.4 | 3490 | 1360 | 2699 | 3563 | 30.2 |
| Stats for D-loop (group size: 0 species) | |||||||
|---|---|---|---|---|---|---|---|
| There is no data for D-loop in this group. |
| Stats for total tRNA-coding genes (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 41.0 | 59.0 | 349 | 237 | 357 | 486 | 11.4 |
| Ovophis okinavensis | 41.9 | 58.1 | 356 | 241 | 357 | 472 | 19.0 |
| Agkistrodon piscivorus | 41.2 | 58.8 | 345 | 243 | 365 | 474 | 24.5 |
| Daboia russellii | 39.5 | 60.5 | 325 | 230 | 381 | 470 | 15.0 |
| Crotalus horridus | 41.4 | 58.6 | 357 | 233 | 358 | 477 | 30.2 |
| Stats for total rRNA-coding genes (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 39.9 | 60.1 | 562 | 389 | 530 | 904 | 11.4 |
| Ovophis okinavensis | 40.7 | 59.3 | 587 | 390 | 523 | 901 | 19.0 |
| Agkistrodon piscivorus | 41.7 | 58.3 | 594 | 408 | 506 | 894 | 24.5 |
| Daboia russellii | 39.7 | 60.3 | 569 | 380 | 555 | 887 | 15.0 |
| Crotalus horridus | 42.6 | 57.4 | 566 | 375 | 467 | 803 | 30.2 |
| Stats for ATP6 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 38.8 | 61.2 | 205 | 59 | 190 | 227 | 11.4 |
| Ovophis okinavensis | 41.6 | 58.4 | 220 | 63 | 191 | 206 | 19.0 |
| Agkistrodon piscivorus | 44.3 | 55.7 | 226 | 76 | 179 | 200 | 24.5 |
| Daboia russellii | 37.3 | 62.7 | 190 | 64 | 207 | 220 | 15.0 |
| Crotalus horridus | 39.8 | 60.2 | 204 | 67 | 181 | 229 | 30.2 |
| Stats for ATP8 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 33.3 | 66.7 | 42 | 13 | 44 | 66 | 11.4 |
| Ovophis okinavensis | 34.5 | 65.5 | 49 | 8 | 42 | 66 | 19.0 |
| Agkistrodon piscivorus | 40.6 | 59.4 | 54 | 13 | 32 | 66 | 24.5 |
| Daboia russellii | 30.9 | 69.1 | 41 | 10 | 51 | 63 | 15.0 |
| Crotalus horridus | 36.4 | 63.6 | 51 | 9 | 34 | 71 | 30.2 |
| Stats for COX1 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 42.6 | 57.4 | 438 | 245 | 455 | 464 | 11.4 |
| Ovophis okinavensis | 43.9 | 56.1 | 450 | 229 | 420 | 447 | 19.0 |
| Agkistrodon piscivorus | 44.9 | 55.1 | 447 | 247 | 416 | 436 | 24.5 |
| Daboia russellii | 41.3 | 58.7 | 417 | 245 | 489 | 451 | 15.0 |
| Crotalus horridus | 45.2 | 54.8 | 458 | 266 | 431 | 447 | 30.2 |
| Stats for COX2 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 45.4 | 54.6 | 204 | 107 | 156 | 218 | 11.4 |
| Ovophis okinavensis | 46.0 | 54.0 | 207 | 108 | 153 | 217 | 19.0 |
| Agkistrodon piscivorus | 47.6 | 52.4 | 216 | 110 | 147 | 212 | 24.5 |
| Daboia russellii | 41.0 | 59.0 | 180 | 101 | 183 | 221 | 15.0 |
| Crotalus horridus | 46.6 | 53.4 | 209 | 110 | 152 | 214 | 30.2 |
| Stats for COX3 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 42.3 | 57.7 | 210 | 122 | 211 | 241 | 11.4 |
| Ovophis okinavensis | 44.0 | 56.0 | 223 | 122 | 206 | 233 | 19.0 |
| Agkistrodon piscivorus | 44.0 | 56.0 | 225 | 120 | 197 | 242 | 24.5 |
| Daboia russellii | 40.1 | 59.9 | 201 | 113 | 232 | 238 | 15.0 |
| Crotalus horridus | 43.7 | 56.3 | 224 | 118 | 197 | 243 | 30.2 |
| Stats for CYTB (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 39.9 | 60.1 | 333 | 111 | 331 | 339 | 11.4 |
| Ovophis okinavensis | 42.5 | 57.5 | 357 | 117 | 310 | 330 | 19.0 |
| Agkistrodon piscivorus | 41.5 | 58.5 | 347 | 115 | 309 | 343 | 24.5 |
| Daboia russellii | 39.6 | 60.4 | 327 | 114 | 334 | 339 | 15.0 |
| Crotalus horridus | 43.4 | 56.6 | 345 | 123 | 303 | 308 | 30.2 |
| Stats for ND1 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 40.9 | 59.1 | 290 | 103 | 259 | 309 | 11.4 |
| Ovophis okinavensis | 42.2 | 57.8 | 301 | 105 | 255 | 300 | 19.0 |
| Agkistrodon piscivorus | 44.3 | 55.7 | 310 | 116 | 240 | 295 | 24.5 |
| Daboia russellii | 40.9 | 59.1 | 291 | 102 | 268 | 300 | 15.0 |
| Crotalus horridus | 44.6 | 55.4 | 303 | 124 | 246 | 284 | 30.2 |
| Stats for ND2 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 38.7 | 61.3 | 312 | 87 | 251 | 380 | 11.4 |
| Ovophis okinavensis | 42.9 | 57.1 | 348 | 94 | 226 | 362 | 19.0 |
| Agkistrodon piscivorus | 42.1 | 57.9 | 342 | 92 | 226 | 370 | 24.5 |
| Daboia russellii | 38.8 | 61.2 | 325 | 75 | 260 | 370 | 15.0 |
| Crotalus horridus | 43.8 | 56.2 | 358 | 96 | 225 | 357 | 30.2 |
| Stats for ND3 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 39.9 | 60.1 | 100 | 37 | 92 | 114 | 11.4 |
| Ovophis okinavensis | 42.0 | 58.0 | 108 | 36 | 89 | 110 | 19.0 |
| Agkistrodon piscivorus | 42.9 | 57.1 | 105 | 42 | 85 | 111 | 24.5 |
| Daboia russellii | 38.8 | 61.2 | 96 | 37 | 103 | 107 | 15.0 |
| Crotalus horridus | 43.1 | 56.9 | 103 | 41 | 82 | 108 | 30.2 |
| Stats for ND4 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 39.2 | 60.8 | 396 | 128 | 350 | 464 | 11.4 |
| Ovophis okinavensis | 42.9 | 57.1 | 437 | 137 | 326 | 438 | 19.0 |
| Agkistrodon piscivorus | 41.8 | 58.2 | 426 | 133 | 324 | 455 | 24.5 |
| Daboia russellii | 39.0 | 61.0 | 391 | 131 | 387 | 429 | 15.0 |
| Crotalus horridus | 45.0 | 55.0 | 404 | 146 | 291 | 380 | 30.2 |
| Stats for ND4L (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 37.1 | 62.9 | 76 | 32 | 88 | 95 | 11.4 |
| Ovophis okinavensis | 35.9 | 64.1 | 70 | 34 | 91 | 95 | 19.0 |
| Agkistrodon piscivorus | 40.2 | 59.8 | 87 | 30 | 79 | 95 | 24.5 |
| Daboia russellii | 35.1 | 64.9 | 74 | 28 | 91 | 98 | 15.0 |
| Crotalus horridus | 41.6 | 58.4 | 91 | 30 | 76 | 94 | 30.2 |
| Stats for ND5 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 36.1 | 63.9 | 484 | 161 | 509 | 634 | 11.4 |
| Ovophis okinavensis | 41.8 | 58.2 | 572 | 176 | 432 | 608 | 19.0 |
| Agkistrodon piscivorus | 41.1 | 58.9 | 554 | 180 | 430 | 624 | 24.5 |
| Daboia russellii | 37.4 | 62.6 | 501 | 162 | 504 | 606 | 15.0 |
| Crotalus horridus | 41.9 | 58.1 | 552 | 192 | 415 | 615 | 30.2 |
| Stats for ND6 (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 37.6 | 62.4 | 163 | 32 | 83 | 241 | 11.4 |
| Ovophis okinavensis | 42.1 | 57.9 | 181 | 36 | 68 | 231 | 19.0 |
| Agkistrodon piscivorus | 43.1 | 56.9 | 187 | 33 | 67 | 223 | 24.5 |
| Daboia russellii | 37.8 | 62.2 | 169 | 27 | 93 | 230 | 15.0 |
| Crotalus horridus | 44.1 | 55.9 | 191 | 39 | 69 | 223 | 30.2 |
| Stats for 12S rRNA gene (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 41.9 | 58.1 | 227 | 153 | 190 | 337 | 11.4 |
| Ovophis okinavensis | 41.4 | 58.6 | 225 | 154 | 191 | 345 | 19.0 |
| Daboia russellii | 41.0 | 59.0 | 219 | 153 | 203 | 333 | 15.0 |
| Stats for 16S rRNA gene (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Trimeresurus albolabris | 38.6 | 61.4 | 335 | 236 | 340 | 567 | 11.4 |
| Ovophis okinavensis | 40.2 | 59.8 | 362 | 236 | 332 | 556 | 19.0 |
| Agkistrodon piscivorus | 40.8 | 59.2 | 363 | 243 | 326 | 555 | 24.5 |
| Daboia russellii | 38.9 | 61.1 | 350 | 227 | 352 | 554 | 15.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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