Stats for family Muridae

Species in family:
Acomys cahirinus
Apodemus peninsulae
Meriones unguiculatus
Mesocricetus auratus
Mus musculus
Nannospalax ehrenbergi
Pseudomys chapmani
Rattus fuscipes
Rattus lutreolus
Rattus norvegicus
Rattus rattus
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Stats for total mtDNA (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 34.8 - 40.6% 59.4 - 65.2% 3674 - 4511 1931 - 2165 4216 - 5054 5307 - 5853 3.8 - 20.2
Median 38.1% 61.9% 4162 2036 4538 5544 4.4
Average ± stdev 37.7 ± 1.7% 62.3 ± 1.7% 4098 ± 254 2049 ± 65 4607 ± 270 5541 ± 147 6.3 ± 4.5
Coefficient of variation 0.04 0.03 0.06 0.03 0.06 0.03 0.72
Pearson correlation
coefficient with log10MLS		 0.22 -0.22 0.19 0.32 -0.32 0.31 -
Pearson p-value
(two tailed)		 5.12E-01 5.11E-01 5.73E-01 3.35E-01 3.41E-01 3.59E-01 -
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Stats for total protein-coding genes (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 35.1 - 41.7% 58.3 - 64.9% 2731 - 3411 1214 - 1362 2975 - 3652 3569 - 3961 3.8 - 20.2
Median 39.0% 61.0% 3123 1283 3203 3708 4.4
Average ± stdev 38.3 ± 2.1% 61.7 ± 2.1% 3055 ± 219 1287 ± 39 3261 ± 220 3727 ± 106 6.3 ± 4.5
Coefficient of variation 0.05 0.03 0.07 0.03 0.07 0.03 0.72
Pearson correlation
coefficient with log10MLS		 0.19 -0.19 0.13 0.30 -0.33 0.29 -
Pearson p-value
(two tailed)		 5.85E-01 5.85E-01 6.94E-01 3.70E-01 3.28E-01 3.93E-01 -
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Stats for D-loop (group size: 10 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 34.0 - 39.3% 60.7 - 66.0% 198 - 222 97 - 127 257 - 319 247 - 318 3.8 - 20.2
Median 36.2% 64.7% 216 104 276 297 4.4
Average ± stdev 36.2 ± 1.6% 63.8 ± 1.6% 214 ± 6 107 ± 9 276 ± 19 291 ± 21 6.2 ± 4.7
Coefficient of variation 0.04 0.02 0.03 0.09 0.07 0.07 0.76
Pearson correlation
coefficient with log10MLS		 -0.33 0.33 -0.05 0.61 0.75 0.38 -
Pearson p-value
(two tailed)		 3.52E-01 3.52E-01 8.85E-01 6.22E-02 1.22E-02 2.82E-01 -
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Stats for total tRNA-coding genes (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 32.8 - 37.3% 62.7 - 67.2% 282 - 332 208 - 237 394 - 455 513 - 565 3.8 - 20.2
Median 35.2% 64.8% 298 225 424 546 4.4
Average ± stdev 35.1 ± 1.4% 64.9 ± 1.4% 300 ± 15 223 ± 7 426 ± 18 543 ± 13 6.3 ± 4.5
Coefficient of variation 0.04 0.02 0.05 0.04 0.04 0.02 0.72
Pearson correlation
coefficient with log10MLS		 0.50 -0.50 0.58 0.02 -0.59 -0.09 -
Pearson p-value
(two tailed)		 1.17E-01 1.17E-01 6.33E-02 9.58E-01 5.38E-02 8.03E-01 -
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Stats for total rRNA-coding genes (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 34.3 - 38.7% 61.3 - 65.7% 451 - 540 404 - 438 572 - 697 918 - 988 3.8 - 20.2
Median 37.4% 62.6% 516 418 627 963 4.4
Average ± stdev 37.0 ± 1.3% 63.0 ± 1.3% 513 ± 25 421 ± 10 633 ± 34 957 ± 19 6.3 ± 4.5
Coefficient of variation 0.03 0.02 0.05 0.02 0.05 0.02 0.72
Pearson correlation
coefficient with log10MLS		 0.38 -0.39 0.36 0.31 -0.45 0.21 -
Pearson p-value
(two tailed)		 2.45E-01 2.41E-01 2.74E-01 3.51E-01 1.70E-01 5.34E-01 -
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Stats for ATP6 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 34.5 - 41.1% 58.9 - 65.5% 170 - 209 65 - 74 172 - 222 211 - 232 3.8 - 20.2
Median 37.9% 62.1% 184 71 204 221 4.4
Average ± stdev 37.7 ± 2.4% 62.3 ± 2.4% 186 ± 13 70 ± 2 201 ± 14 222 ± 5 6.3 ± 4.5
Coefficient of variation 0.06 0.04 0.08 0.04 0.07 0.03 0.72
Pearson correlation
coefficient with log10MLS		 0.43 -0.43 0.42 0.26 -0.56 0.28 -
Pearson p-value
(two tailed)		 1.91E-01 1.91E-01 2.04E-01 4.41E-01 7.14E-02 4.03E-01 -
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Stats for ATP8 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 30.2 - 36.3% 63.7 - 69.8% 48 - 63 10 - 14 52 - 66 68 - 83 3.8 - 20.2
Median 34.8% 65.2% 57 13 56 77 4.4
Average ± stdev 33.8 ± 2.2% 66.2 ± 2.2% 56 ± 4 12 ± 1 57 ± 4 76 ± 3 6.3 ± 4.5
Coefficient of variation 0.07 0.03 0.08 0.10 0.07 0.05 0.72
Pearson correlation
coefficient with log10MLS		 0.02 -0.02 -0.07 0.20 -0.35 0.27 -
Pearson p-value
(two tailed)		 9.55E-01 9.55E-01 8.32E-01 5.46E-01 2.91E-01 4.20E-01 -
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Stats for COX1 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.7 - 44.1% 55.9 - 62.3% 331 - 421 237 - 264 445 - 514 418 - 477 3.8 - 20.2
Median 40.6% 59.4% 373 248 473 445 4.4
Average ± stdev 40.3 ± 1.9% 59.7 ± 1.9% 374 ± 24 249 ± 8 471 ± 19 449 ± 17 6.3 ± 4.5
Coefficient of variation 0.05 0.03 0.06 0.03 0.04 0.04 0.72
Pearson correlation
coefficient with log10MLS		 0.17 -0.17 0.05 0.40 -0.47 0.25 -
Pearson p-value
(two tailed)		 6.18E-01 6.18E-01 8.75E-01 2.23E-01 1.43E-01 4.53E-01 -
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Stats for COX2 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 35.1 - 41.5% 58.5 - 64.9% 144 - 188 88 - 101 176 - 215 224 - 241 3.8 - 20.2
Median 39.5% 60.5% 176 91 182 231 4.4
Average ± stdev 38.6 ± 2.2% 61.4 ± 2.2% 171 ± 14 92 ± 4 188 ± 12 231 ± 5 6.3 ± 4.5
Coefficient of variation 0.06 0.04 0.08 0.05 0.06 0.02 0.72
Pearson correlation
coefficient with log10MLS		 0.27 -0.27 0.10 0.58 -0.33 0.03 -
Pearson p-value
(two tailed)		 4.26E-01 4.26E-01 7.81E-01 6.16E-02 3.18E-01 9.37E-01 -
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Stats for COX3 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.0 - 44.1% 55.9 - 62.0% 189 - 234 106 - 121 204 - 258 216 - 246 3.8 - 20.2
Median 40.8% 59.2% 211 108 226 234 4.4
Average ± stdev 40.7 ± 1.9% 59.3 ± 1.9% 208 ± 13 110 ± 5 231 ± 14 232 ± 7 6.3 ± 4.5
Coefficient of variation 0.05 0.03 0.07 0.05 0.06 0.03 0.72
Pearson correlation
coefficient with log10MLS		 0.42 -0.42 0.20 0.65 -0.36 -0.11 -
Pearson p-value
(two tailed)		 1.93E-01 1.93E-01 5.48E-01 3.00E-02 2.76E-01 7.38E-01 -
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Stats for CYTB (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 36.5 - 44.1% 55.9 - 63.5% 272 - 355 135 - 156 301 - 382 322 - 384 3.8 - 20.2
Median 40.2% 59.8% 319 141 327 348 4.4
Average ± stdev 40.2 ± 2.3% 59.8 ± 2.3% 316 ± 24 143 ± 5 330 ± 24 352 ± 16 6.3 ± 4.5
Coefficient of variation 0.06 0.04 0.08 0.04 0.07 0.05 0.72
Pearson correlation
coefficient with log10MLS		 0.07 -0.07 0.08 -0.10 -0.33 0.36 -
Pearson p-value
(two tailed)		 8.32E-01 8.32E-01 8.11E-01 7.71E-01 3.25E-01 2.73E-01 -
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Stats for ND1 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 35.7 - 42.9% 57.1 - 64.3% 234 - 303 102 - 123 247 - 315 279 - 327 3.8 - 20.2
Median 40.5% 59.5% 283 107 272 295 4.4
Average ± stdev 39.7 ± 2.8% 60.3 ± 2.8% 270 ± 24 108 ± 6 278 ± 23 296 ± 13 6.3 ± 4.5
Coefficient of variation 0.07 0.05 0.09 0.06 0.08 0.05 0.72
Pearson correlation
coefficient with log10MLS		 0.15 -0.15 0.11 0.01 -0.40 0.30 -
Pearson p-value
(two tailed)		 6.67E-01 6.67E-01 7.49E-01 9.84E-01 2.21E-01 3.66E-01 -
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Stats for ND2 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 30.7 - 41.1% 58.9 - 69.3% 248 - 344 70 - 94 242 - 343 342 - 409 3.8 - 20.2
Median 37.7% 62.3% 304 83 280 370 4.4
Average ± stdev 36.6 ± 3.0% 63.4 ± 3.0% 296 ± 27 82 ± 7 286 ± 30 371 ± 16 6.3 ± 4.5
Coefficient of variation 0.08 0.05 0.09 0.09 0.11 0.04 0.72
Pearson correlation
coefficient with log10MLS		 0.06 -0.06 0.01 0.31 -0.04 0.01 -
Pearson p-value
(two tailed)		 8.52E-01 8.52E-01 9.84E-01 3.58E-01 9.17E-01 9.84E-01 -
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Stats for ND3 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 31.9 - 41.4% 58.6 - 68.1% 77 - 106 32 - 43 96 - 126 96 - 121 3.8 - 20.2
Median 35.6% 64.4% 89 38 108 116 4.4
Average ± stdev 36.3 ± 2.9% 63.7 ± 2.9% 89 ± 8 37 ± 3 109 ± 8 112 ± 7 6.3 ± 4.5
Coefficient of variation 0.08 0.05 0.09 0.08 0.08 0.07 0.72
Pearson correlation
coefficient with log10MLS		 0.51 -0.51 0.39 0.57 -0.47 -0.12 -
Pearson p-value
(two tailed)		 1.06E-01 1.06E-01 2.32E-01 6.95E-02 1.48E-01 7.26E-01 -
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Stats for ND4 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 33.2 - 39.2% 60.8 - 66.8% 315 - 409 130 - 142 351 - 452 447 - 496 3.8 - 20.2
Median 36.8% 63.2% 365 137 385 476 4.4
Average ± stdev 36.6 ± 2.2% 63.4 ± 2.2% 367 ± 30 136 ± 4 398 ± 32 474 ± 12 6.3 ± 4.5
Coefficient of variation 0.06 0.03 0.08 0.03 0.08 0.03 0.72
Pearson correlation
coefficient with log10MLS		 0.07 -0.07 0.04 0.17 -0.18 0.29 -
Pearson p-value
(two tailed)		 8.30E-01 8.30E-01 9.08E-01 6.10E-01 5.95E-01 3.92E-01 -
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Stats for ND4L (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 33.3 - 42.8% 57.2 - 66.7% 67 - 93 28 - 36 83 - 104 86 - 95 3.8 - 20.2
Median 37.4% 62.6% 81 32 95 91 4.4
Average ± stdev 38.0 ± 3.1% 62.0 ± 3.1% 81 ± 8 31 ± 2 93 ± 6 90 ± 2 6.3 ± 4.5
Coefficient of variation 0.08 0.05 0.11 0.07 0.07 0.03 0.72
Pearson correlation
coefficient with log10MLS		 -0.14 0.14 -0.13 -0.02 0.11 0.18 -
Pearson p-value
(two tailed)		 6.83E-01 6.83E-01 6.96E-01 9.43E-01 7.51E-01 5.92E-01 -
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Stats for ND5 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 34.1 - 41.3% 58.7 - 65.9% 442 - 564 168 - 193 477 - 586 587 - 649 3.8 - 20.2
Median 37.2% 62.8% 504 180 519 619 4.4
Average ± stdev 37.2 ± 2.0% 62.8 ± 2.0% 498 ± 36 181 ± 7 526 ± 34 618 ± 18 6.3 ± 4.5
Coefficient of variation 0.05 0.03 0.07 0.04 0.07 0.03 0.72
Pearson correlation
coefficient with log10MLS		 0.12 -0.12 0.16 -0.23 -0.35 0.42 -
Pearson p-value
(two tailed)		 7.36E-01 7.36E-01 6.40E-01 4.93E-01 2.88E-01 1.96E-01 -
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Stats for ND6 (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 33.7 - 39.8% 60.2 - 66.3% 138 - 169 31 - 45 87 - 136 206 - 237 3.8 - 20.2
Median 37.4% 62.6% 156 38 103 226 4.4
Average ± stdev 36.8 ± 2.3% 63.2 ± 2.3% 154 ± 11 37 ± 4 106 ± 14 222 ± 8 6.3 ± 4.5
Coefficient of variation 0.06 0.04 0.07 0.11 0.13 0.04 0.72
Pearson correlation
coefficient with log10MLS		 0.31 -0.31 0.44 -0.22 -0.31 0.21 -
Pearson p-value
(two tailed)		 3.57E-01 3.57E-01 1.79E-01 5.07E-01 3.53E-01 5.34E-01 -
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Stats for 12S rRNA gene (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 35.2 - 40.9% 59.1 - 64.8% 181 - 220 154 - 171 218 - 258 333 - 370 3.8 - 20.2
Median 38.3% 61.7% 203 161 233 360 4.4
Average ± stdev 38.0 ± 1.5% 62.0 ± 1.5% 202 ± 10 161 ± 5 237 ± 11 355 ± 10 6.3 ± 4.5
Coefficient of variation 0.04 0.02 0.05 0.04 0.05 0.03 0.72
Pearson correlation
coefficient with log10MLS		 0.35 -0.35 0.20 0.47 -0.61 0.20 -
Pearson p-value
(two tailed)		 2.92E-01 2.92E-01 5.63E-01 1.46E-01 4.69E-02 5.49E-01 -
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Stats for 16S rRNA gene (group size: 11 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 33.8 - 38.8% 61.2 - 66.2% 270 - 337 248 - 270 354 - 439 579 - 618 3.8 - 20.2
Median 36.9% 63.1% 306 261 394 604 4.4
Average ± stdev 36.4 ± 1.4% 63.6 ± 1.4% 310 ± 18 260 ± 6 396 ± 24 601 ± 10 6.3 ± 4.5
Coefficient of variation 0.04 0.02 0.06 0.02 0.06 0.02 0.72
Pearson correlation
coefficient with log10MLS		 0.33 -0.34 0.39 0.09 -0.33 0.20 -
Pearson p-value
(two tailed)		 3.18E-01 3.13E-01 2.41E-01 7.93E-01 3.14E-01 5.59E-01 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.