Stats for family Trionychidae
| Stats for total mtDNA (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
39.2 |
60.8 |
4543 |
2025 |
4231 |
5950 |
25.2 |
| Lissemys punctata |
38.6 |
61.4 |
4347 |
2015 |
4235 |
5892 |
17.8 |
| Palea steindachneri |
38.6 |
61.4 |
4542 |
2119 |
4572 |
6010 |
41.0 |
| Apalone ferox |
38.8 |
61.2 |
4551 |
1995 |
4281 |
6039 |
26.2 |
| Trionyx triunguis |
41.5 |
58.5 |
4864 |
2024 |
3840 |
5862 |
50.6 |
| Stats for total protein-coding genes (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
40.4 |
59.6 |
3321 |
1257 |
2814 |
3926 |
25.2 |
| Lissemys punctata |
38.8 |
61.2 |
3171 |
1223 |
2938 |
3979 |
17.8 |
| Palea steindachneri |
39.2 |
60.8 |
3210 |
1227 |
2968 |
3921 |
41.0 |
| Apalone ferox |
39.8 |
60.2 |
3296 |
1212 |
2820 |
4000 |
26.2 |
| Trionyx triunguis |
42.8 |
57.2 |
3575 |
1266 |
2587 |
3891 |
50.6 |
| Stats for D-loop (group size: 4 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
30.6 |
69.4 |
264 |
114 |
446 |
410 |
25.2 |
| Palea steindachneri |
34.3 |
65.7 |
366 |
229 |
631 |
510 |
41.0 |
| Apalone ferox |
32.6 |
67.4 |
303 |
140 |
485 |
429 |
26.2 |
| Trionyx triunguis |
32.9 |
67.1 |
256 |
99 |
337 |
386 |
50.6 |
| Stats for total tRNA-coding genes (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
38.1 |
61.9 |
354 |
234 |
414 |
543 |
25.2 |
| Lissemys punctata |
39.0 |
61.0 |
368 |
236 |
403 |
543 |
17.8 |
| Palea steindachneri |
38.0 |
62.0 |
347 |
239 |
417 |
538 |
41.0 |
| Apalone ferox |
37.4 |
62.6 |
353 |
228 |
420 |
552 |
26.2 |
| Trionyx triunguis |
39.5 |
60.5 |
373 |
235 |
391 |
539 |
50.6 |
| Stats for total rRNA-coding genes (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
38.9 |
61.1 |
589 |
415 |
544 |
1036 |
25.2 |
| Lissemys punctata |
39.6 |
60.3 |
578 |
431 |
559 |
978 |
17.8 |
| Palea steindachneri |
39.5 |
60.5 |
600 |
419 |
550 |
1014 |
41.0 |
| Apalone ferox |
38.8 |
61.2 |
591 |
410 |
548 |
1034 |
26.2 |
| Trionyx triunguis |
41.0 |
59.0 |
645 |
415 |
511 |
1014 |
50.6 |
| Stats for ATP6 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
41.4 |
58.6 |
219 |
64 |
162 |
239 |
25.2 |
| Lissemys punctata |
36.1 |
63.9 |
189 |
58 |
185 |
252 |
17.8 |
| Palea steindachneri |
38.5 |
61.5 |
197 |
66 |
180 |
241 |
41.0 |
| Apalone ferox |
40.2 |
59.8 |
214 |
61 |
162 |
247 |
26.2 |
| Trionyx triunguis |
43.0 |
57.0 |
237 |
57 |
150 |
240 |
50.6 |
| Stats for ATP8 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
33.3 |
66.7 |
45 |
10 |
40 |
70 |
25.2 |
| Lissemys punctata |
35.2 |
64.8 |
49 |
9 |
44 |
63 |
17.8 |
| Palea steindachneri |
35.8 |
64.2 |
51 |
8 |
39 |
67 |
41.0 |
| Apalone ferox |
33.3 |
66.7 |
48 |
7 |
38 |
72 |
26.2 |
| Trionyx triunguis |
35.8 |
64.2 |
52 |
7 |
37 |
69 |
50.6 |
| Stats for COX1 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
42.8 |
57.2 |
401 |
261 |
432 |
451 |
25.2 |
| Lissemys punctata |
41.3 |
58.7 |
391 |
243 |
439 |
463 |
17.8 |
| Palea steindachneri |
41.3 |
58.7 |
387 |
251 |
454 |
453 |
41.0 |
| Apalone ferox |
42.0 |
58.0 |
398 |
250 |
430 |
464 |
26.2 |
| Trionyx triunguis |
43.5 |
56.5 |
422 |
247 |
418 |
452 |
50.6 |
| Stats for COX2 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
38.6 |
61.4 |
179 |
86 |
172 |
250 |
25.2 |
| Lissemys punctata |
38.1 |
61.9 |
177 |
85 |
176 |
249 |
17.8 |
| Palea steindachneri |
37.0 |
63.0 |
173 |
81 |
178 |
255 |
41.0 |
| Apalone ferox |
38.4 |
61.6 |
180 |
84 |
170 |
253 |
26.2 |
| Trionyx triunguis |
41.6 |
58.4 |
198 |
88 |
153 |
248 |
50.6 |
| Stats for COX3 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
43.4 |
56.6 |
223 |
117 |
196 |
248 |
25.2 |
| Lissemys punctata |
42.3 |
57.7 |
222 |
110 |
208 |
244 |
17.8 |
| Palea steindachneri |
43.3 |
56.7 |
222 |
116 |
201 |
242 |
41.0 |
| Apalone ferox |
42.7 |
57.3 |
220 |
115 |
198 |
251 |
26.2 |
| Trionyx triunguis |
46.7 |
53.3 |
240 |
126 |
187 |
231 |
50.6 |
| Stats for CYTB (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
41.1 |
58.9 |
330 |
135 |
303 |
363 |
25.2 |
| Lissemys punctata |
39.6 |
60.4 |
326 |
126 |
310 |
378 |
17.8 |
| Palea steindachneri |
40.0 |
60.0 |
337 |
119 |
311 |
373 |
41.0 |
| Apalone ferox |
42.3 |
57.7 |
356 |
128 |
285 |
375 |
26.2 |
| Trionyx triunguis |
44.2 |
55.8 |
365 |
139 |
266 |
370 |
50.6 |
| Stats for ND1 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
40.9 |
59.1 |
290 |
107 |
259 |
315 |
25.2 |
| Lissemys punctata |
38.1 |
61.9 |
268 |
101 |
277 |
323 |
17.8 |
| Palea steindachneri |
40.1 |
59.9 |
279 |
111 |
277 |
306 |
41.0 |
| Apalone ferox |
38.8 |
61.2 |
273 |
104 |
269 |
325 |
26.2 |
| Trionyx triunguis |
43.5 |
56.5 |
317 |
106 |
240 |
309 |
50.6 |
| Stats for ND2 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
37.9 |
62.1 |
309 |
85 |
247 |
398 |
25.2 |
| Lissemys punctata |
35.4 |
64.6 |
279 |
88 |
260 |
409 |
17.8 |
| Palea steindachneri |
37.4 |
62.6 |
295 |
94 |
252 |
398 |
41.0 |
| Apalone ferox |
37.7 |
62.3 |
307 |
85 |
248 |
399 |
26.2 |
| Trionyx triunguis |
39.4 |
60.6 |
323 |
86 |
235 |
395 |
50.6 |
| Stats for ND3 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
38.0 |
62.0 |
99 |
34 |
96 |
121 |
25.2 |
| Lissemys punctata |
40.0 |
60.0 |
105 |
35 |
90 |
120 |
17.8 |
| Palea steindachneri |
39.1 |
60.9 |
106 |
31 |
93 |
120 |
41.0 |
| Apalone ferox |
39.1 |
60.9 |
100 |
37 |
97 |
116 |
26.2 |
| Trionyx triunguis |
41.7 |
58.3 |
109 |
37 |
86 |
118 |
50.6 |
| Stats for ND4 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
39.2 |
60.8 |
415 |
126 |
338 |
502 |
25.2 |
| Lissemys punctata |
38.2 |
61.8 |
404 |
123 |
355 |
499 |
17.8 |
| Palea steindachneri |
37.1 |
62.9 |
387 |
126 |
368 |
500 |
41.0 |
| Apalone ferox |
39.0 |
61.0 |
419 |
119 |
330 |
513 |
26.2 |
| Trionyx triunguis |
43.3 |
56.7 |
463 |
135 |
292 |
491 |
50.6 |
| Stats for ND4L (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
40.7 |
59.3 |
96 |
25 |
79 |
97 |
25.2 |
| Lissemys punctata |
39.4 |
60.6 |
88 |
29 |
90 |
90 |
17.8 |
| Palea steindachneri |
35.0 |
65.0 |
81 |
23 |
98 |
95 |
41.0 |
| Apalone ferox |
39.1 |
60.9 |
90 |
26 |
82 |
99 |
26.2 |
| Trionyx triunguis |
44.1 |
55.9 |
103 |
28 |
72 |
94 |
50.6 |
| Stats for ND5 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
40.7 |
59.3 |
548 |
176 |
428 |
627 |
25.2 |
| Lissemys punctata |
39.5 |
60.5 |
521 |
182 |
434 |
642 |
17.8 |
| Palea steindachneri |
39.3 |
60.7 |
533 |
166 |
450 |
630 |
41.0 |
| Apalone ferox |
39.0 |
61.0 |
530 |
164 |
445 |
640 |
26.2 |
| Trionyx triunguis |
41.9 |
58.1 |
565 |
180 |
406 |
628 |
50.6 |
| Stats for ND6 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
38.4 |
61.6 |
170 |
33 |
69 |
256 |
25.2 |
| Lissemys punctata |
36.6 |
63.4 |
156 |
36 |
76 |
257 |
17.8 |
| Palea steindachneri |
38.1 |
61.9 |
164 |
37 |
75 |
252 |
41.0 |
| Apalone ferox |
37.5 |
62.5 |
164 |
34 |
73 |
257 |
26.2 |
| Trionyx triunguis |
41.1 |
58.9 |
184 |
32 |
52 |
257 |
50.6 |
| Stats for 12S rRNA gene (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
40.3 |
59.7 |
230 |
161 |
206 |
373 |
25.2 |
| Lissemys punctata |
41.2 |
58.7 |
233 |
169 |
205 |
368 |
17.8 |
| Palea steindachneri |
41.4 |
58.6 |
238 |
165 |
210 |
361 |
41.0 |
| Apalone ferox |
41.2 |
58.8 |
241 |
159 |
201 |
371 |
26.2 |
| Trionyx triunguis |
42.5 |
57.5 |
254 |
161 |
197 |
365 |
50.6 |
| Stats for 16S rRNA gene (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Apalone spinifera |
38.0 |
62.0 |
359 |
254 |
338 |
663 |
25.2 |
| Lissemys punctata |
38.6 |
61.4 |
345 |
262 |
354 |
610 |
17.8 |
| Palea steindachneri |
38.3 |
61.7 |
362 |
254 |
340 |
653 |
41.0 |
| Apalone ferox |
37.3 |
62.7 |
350 |
251 |
347 |
663 |
26.2 |
| Trionyx triunguis |
40.1 |
59.9 |
391 |
254 |
314 |
649 |
50.6 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email: 
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.
