Stats for family Cervidae

Species in family:

Pudu puda
Rangifer tarandus
Rucervus duvaucelii
Rucervus eldi
Rusa alfredi
Rusa timorensis
Rusa unicolor

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Stats for total mtDNA (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	35.5 - 38.2%	61.8 - 64.5%	3706 - 4038	2106 - 2221	4685 - 4992	5418 - 5553	13.9 - 31.5
Median	37.4%	62.6%	3969	2186	4790	5477	21.9
Average ± stdev	37.2 ± 0.7%	62.8 ± 0.7%	3917 ± 98	2180 ± 25	4805 ± 92	5479 ± 40	21.9 ± 3.8
Coefficient of variation	0.02	0.01	0.03	0.01	0.02	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.50	-0.50	0.53	0.30	-0.55	-0.05	-
Pearson p-value (two tailed)	1.78E-02	1.67E-02	1.13E-02	1.79E-01	8.40E-03	8.19E-01	-

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Stats for total protein-coding genes (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	35.1 - 38.2%	61.8 - 64.9%	2680 - 2962	1302 - 1397	3345 - 3603	3642 - 3758	13.9 - 31.5
Median	37.6%	62.7%	2900	1359	3444	3678	21.9
Average ± stdev	37.2 ± 0.9%	62.8 ± 0.9%	2855 ± 89	1357 ± 19	3442 ± 81	3680 ± 27	21.9 ± 3.8
Coefficient of variation	0.02	0.01	0.03	0.01	0.02	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.50	-0.51	0.52	0.22	-0.58	-0.18	-
Pearson p-value (two tailed)	1.78E-02	1.63E-02	1.31E-02	3.33E-01	4.93E-03	4.31E-01	-

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Stats for D-loop (group size: 11 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	36.1 - 40.1%	59.9 - 63.9%	213 - 234	129 - 166	283 - 348	268 - 343	13.9 - 31.5
Median	38.3%	61.7%	219	141	290	273	23.0
Average ± stdev	38.3 ± 1.3%	61.7 ± 1.3%	220 ± 6	142 ± 9	301 ± 21	287 ± 25	23.2 ± 4.5
Coefficient of variation	0.03	0.02	0.03	0.07	0.07	0.09	0.19
Pearson correlation coefficient with log₁₀MLS	-0.14	0.14	0.15	0.27	0.18	0.26	-
Pearson p-value (two tailed)	6.71E-01	6.71E-01	6.53E-01	4.29E-01	5.97E-01	4.41E-01	-

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Stats for total tRNA-coding genes (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	35.3 - 36.5%	63.5 - 64.7%	299 - 318	227 - 246	420 - 434	533 - 551	13.9 - 31.5
Median	36.1%	63.9%	310	235	428	542	21.9
Average ± stdev	36.0 ± 0.4%	64.0 ± 0.4%	309 ± 4	235 ± 4	427 ± 4	541 ± 4	21.9 ± 3.8
Coefficient of variation	0.01	0.01	0.02	0.02	0.01	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.39	-0.38	0.27	0.33	-0.33	0.01	-
Pearson p-value (two tailed)	7.35E-02	8.01E-02	2.24E-01	1.37E-01	1.30E-01	9.54E-01	-

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Stats for total rRNA-coding genes (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	37.1 - 38.5%	61.5 - 62.9%	500 - 537	429 - 445	604 - 639	936 - 956	13.9 - 31.5
Median	38.1%	61.8%	523	438	617	946	21.9
Average ± stdev	38.0 ± 0.4%	62.0 ± 0.4%	521 ± 8	438 ± 3	619 ± 9	946 ± 4	21.9 ± 3.8
Coefficient of variation	0.01	0.01	0.02	0.01	0.02	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.45	-0.43	0.47	0.23	-0.34	0.06	-
Pearson p-value (two tailed)	3.40E-02	4.84E-02	2.80E-02	3.08E-01	1.18E-01	7.96E-01	-

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Stats for ATP6 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	35.5 - 39.4%	60.6 - 64.5%	165 - 188	75 - 85	202 - 223	209 - 219	13.9 - 31.5
Median	37.7%	62.4%	177	81	210	214	21.9
Average ± stdev	37.7 ± 1.0%	62.3 ± 1.0%	176 ± 5	80 ± 2	210 ± 5	213 ± 2	21.9 ± 3.8
Coefficient of variation	0.03	0.02	0.03	0.03	0.03	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.30	-0.30	0.31	0.07	-0.42	0.14	-
Pearson p-value (two tailed)	1.79E-01	1.78E-01	1.60E-01	7.49E-01	5.45E-02	5.37E-01	-

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Stats for ATP8 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	25.9 - 34.7%	65.3 - 74.1%	39 - 201	10 - 91	56 - 269	80 - 281	13.9 - 31.5
Median	29.4%	70.6%	44	12	62	82	21.9
Average ± stdev	28.9 ± 1.9%	71.1 ± 1.9%	51 ± 32	16 ± 16	70 ± 43	91 ± 41	21.9 ± 3.8
Coefficient of variation	0.07	0.03	0.63	1.01	0.61	0.46	0.17
Pearson correlation coefficient with log₁₀MLS	-0.21	0.21	0.04	0.05	0.08	0.07	-
Pearson p-value (two tailed)	3.39E-01	3.39E-01	8.57E-01	8.18E-01	7.21E-01	7.52E-01	-

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Stats for COX1 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	36.0 - 39.7%	60.3 - 64.0%	313 - 364	243 - 255	484 - 541	439 - 458	13.9 - 31.5
Median	38.5%	61.5%	349	249	502	448	21.9
Average ± stdev	38.3 ± 1.1%	61.7 ± 1.1%	342 ± 13	248 ± 3	504 ± 14	448 ± 3	21.9 ± 3.8
Coefficient of variation	0.03	0.02	0.04	0.01	0.03	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.61	-0.61	0.63	0.34	-0.65	-0.17	-
Pearson p-value (two tailed)	2.67E-03	2.39E-03	1.81E-03	1.21E-01	9.73E-04	4.53E-01	-

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Stats for COX2 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	33.8 - 37.4%	62.6 - 66.2%	140 - 159	87 - 99	191 - 211	231 - 247	13.9 - 31.5
Median	36.4%	63.7%	154	95	198	238	21.9
Average ± stdev	36.1 ± 1.1%	63.9 ± 1.1%	152 ± 5	94 ± 3	198 ± 5	238 ± 3	21.9 ± 3.8
Coefficient of variation	0.03	0.02	0.03	0.03	0.03	0.02	0.17
Pearson correlation coefficient with log₁₀MLS	0.41	-0.42	0.42	0.28	-0.51	-0.09	-
Pearson p-value (two tailed)	5.79E-02	5.47E-02	4.98E-02	1.99E-01	1.54E-02	6.79E-01	-

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Stats for COX3 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	39.3 - 42.6%	57.3 - 60.7%	192 - 223	109 - 119	233 - 269	206 - 220	13.9 - 31.5
Median	42.0%	58.3%	216	113	241	215	21.9
Average ± stdev	41.7 ± 0.8%	58.3 ± 0.8%	213 ± 7	112 ± 2	243 ± 8	213 ± 4	21.9 ± 3.8
Coefficient of variation	0.02	0.01	0.03	0.02	0.04	0.02	0.17
Pearson correlation coefficient with log₁₀MLS	0.10	-0.07	0.21	-0.34	-0.26	0.42	-
Pearson p-value (two tailed)	6.66E-01	7.42E-01	3.52E-01	1.24E-01	2.35E-01	5.10E-02	-

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Stats for CYTB (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	36.5 - 41.1%	58.9 - 63.5%	277 - 318	139 - 156	318 - 357	346 - 367	13.9 - 31.5
Median	40.0%	60.3%	307	147	330	355	21.9
Average ± stdev	39.6 ± 1.2%	60.4 ± 1.2%	303 ± 10	147 ± 3	332 ± 11	355 ± 5	21.9 ± 3.8
Coefficient of variation	0.03	0.02	0.04	0.03	0.03	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.36	-0.36	0.34	0.27	-0.37	-0.15	-
Pearson p-value (two tailed)	1.00E-01	9.64E-02	1.16E-01	2.20E-01	9.03E-02	5.17E-01	-

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Stats for ND1 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	35.3 - 39.5%	60.5 - 64.7%	227 - 263	110 - 121	277 - 312	295 - 311	13.9 - 31.5
Median	37.9%	62.1%	250	114	292	302	21.9
Average ± stdev	37.6 ± 1.4%	62.4 ± 1.4%	246 ± 10	113 ± 2	293 ± 9	302 ± 4	21.9 ± 3.8
Coefficient of variation	0.04	0.02	0.04	0.02	0.03	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.56	-0.56	0.55	0.39	-0.65	-0.23	-
Pearson p-value (two tailed)	6.78E-03	6.78E-03	7.92E-03	7.25E-02	1.15E-03	3.12E-01	-

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Stats for ND2 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	32.0 - 36.6%	63.4 - 68.0%	244 - 283	84 - 98	287 - 327	374 - 392	13.9 - 31.5
Median	34.3%	65.8%	264	92	303	383	21.9
Average ± stdev	34.0 ± 1.1%	66.0 ± 1.1%	263 ± 9	91 ± 3	305 ± 9	382 ± 4	21.9 ± 3.8
Coefficient of variation	0.03	0.02	0.04	0.04	0.03	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.41	-0.41	0.45	0.07	-0.48	0.00	-
Pearson p-value (two tailed)	5.75E-02	5.75E-02	3.69E-02	7.58E-01	2.28E-02	9.88E-01	-

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Stats for ND3 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	35.3 - 40.8%	59.2 - 64.7%	82 - 98	38 - 45	101 - 115	103 - 112	13.9 - 31.5
Median	38.2%	62.1%	90	42	107	107	21.9
Average ± stdev	38.0 ± 1.4%	62.0 ± 1.4%	89 ± 3	41 ± 1	107 ± 3	106 ± 2	21.9 ± 3.8
Coefficient of variation	0.04	0.02	0.04	0.04	0.03	0.02	0.17
Pearson correlation coefficient with log₁₀MLS	0.41	-0.41	0.44	0.22	-0.42	-0.16	-
Pearson p-value (two tailed)	6.04E-02	5.60E-02	4.26E-02	3.16E-01	4.91E-02	4.77E-01	-

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Stats for ND4 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	34.2 - 38.2%	61.8 - 65.8%	333 - 377	138 - 157	416 - 453	431 - 454	13.9 - 31.5
Median	37.3%	62.8%	366	149	427	440	21.9
Average ± stdev	36.8 ± 1.2%	63.2 ± 1.1%	357 ± 15	148 ± 5	431 ± 12	440 ± 6	21.9 ± 3.8
Coefficient of variation	0.03	0.02	0.04	0.03	0.03	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.37	-0.38	0.37	0.04	-0.39	-0.15	-
Pearson p-value (two tailed)	8.75E-02	8.55E-02	8.83E-02	8.68E-01	7.54E-02	5.15E-01	-

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Stats for ND4L (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	31.6 - 37.4%	62.6 - 68.4%	59 - 74	35 - 41	92 - 106	89 - 98	13.9 - 31.5
Median	35.4%	64.6%	68	38	98	93	21.9
Average ± stdev	35.3 ± 1.4%	64.7 ± 1.4%	67 ± 3	37 ± 1	98 ± 3	93 ± 2	21.9 ± 3.8
Coefficient of variation	0.04	0.02	0.06	0.04	0.04	0.03	0.17
Pearson correlation coefficient with log₁₀MLS	0.17	-0.17	0.17	0.01	-0.17	-0.02	-
Pearson p-value (two tailed)	4.58E-01	4.41E-01	4.43E-01	9.57E-01	4.49E-01	9.28E-01	-

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Stats for ND5 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	33.7 - 37.4%	62.6 - 66.3%	433 - 490	179 - 199	527 - 583	600 - 626	13.9 - 31.5
Median	36.3%	63.8%	470	193	551	609	21.9
Average ± stdev	36.0 ± 1.1%	64.0 ± 1.1%	463 ± 18	191 ± 4	553 ± 16	611 ± 6	21.9 ± 3.8
Coefficient of variation	0.03	0.02	0.04	0.02	0.03	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.42	-0.43	0.48	-0.20	-0.47	-0.26	-
Pearson p-value (two tailed)	4.96E-02	4.80E-02	2.41E-02	3.83E-01	2.63E-02	2.51E-01	-

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Stats for ND6 (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	33.3 - 37.9%	62.1 - 66.7%	137 - 155	38 - 46	115 - 133	210 - 222	13.9 - 31.5
Median	36.0%	64.2%	149	42	123	216	21.9
Average ± stdev	35.8 ± 1.3%	64.2 ± 1.3%	146 ± 6	42 ± 2	123 ± 5	215 ± 3	21.9 ± 3.8
Coefficient of variation	0.04	0.02	0.04	0.05	0.04	0.02	0.17
Pearson correlation coefficient with log₁₀MLS	0.49	-0.49	0.40	0.43	-0.25	-0.62	-
Pearson p-value (two tailed)	2.02E-02	2.02E-02	6.36E-02	4.49E-02	2.58E-01	2.14E-03	-

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Stats for 12S rRNA gene (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	39.2 - 41.3%	58.7 - 60.8%	201 - 222	168 - 174	213 - 239	342 - 356	13.9 - 31.5
Median	40.3%	59.8%	214	170	223	350	21.9
Average ± stdev	40.1 ± 0.6%	59.9 ± 0.6%	213 ± 5	170 ± 1	222 ± 6	349 ± 3	21.9 ± 3.8
Coefficient of variation	0.02	0.01	0.03	0.01	0.03	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.40	-0.40	0.43	-0.14	-0.26	-0.11	-
Pearson p-value (two tailed)	6.81E-02	6.81E-02	4.80E-02	5.42E-01	2.37E-01	6.11E-01	-

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Stats for 16S rRNA gene (group size: 22 species)
	GC (%)	AT (%)	G (bases)	C (bases)	A (bases)	T (bases)	Maximum lifespan (yrs)
Range (min-max)	35.2 - 37.3%	62.7 - 64.8%	291 - 319	261 - 274	384 - 419	586 - 603	13.9 - 31.5
Median	36.8%	63.2%	309	268	397	597	21.9
Average ± stdev	36.7 ± 0.5%	63.3 ± 0.5%	308 ± 6	267 ± 3	396 ± 7	596 ± 3	21.9 ± 3.8
Coefficient of variation	0.01	0.01	0.02	0.01	0.02	0.01	0.17
Pearson correlation coefficient with log₁₀MLS	0.29	-0.25	0.24	0.33	-0.21	0.17	-
Pearson p-value (two tailed)	1.95E-01	2.65E-01	2.76E-01	1.28E-01	3.44E-01	4.58E-01	-

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:

How to cite us:: If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.

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