Stats for class Echinoidea
| Stats for total mtDNA (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 41.0 | 59.0 | 3547 | 2873 | 4732 | 4498 | 50.0 |
| Stats for total protein-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 41.5 | 58.5 | 2733 | 2036 | 3622 | 3096 | 50.0 |
| Stats for D-loop (group size: 0 species) | |||||||
|---|---|---|---|---|---|---|---|
| There is no data for D-loop in this group. |
| Stats for total tRNA-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 39.6 | 60.4 | 302 | 309 | 436 | 494 | 50.0 |
| Stats for total rRNA-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 40.0 | 60.0 | 473 | 490 | 597 | 848 | 50.0 |
| Stats for ATP6 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 39.7 | 60.3 | 164 | 112 | 234 | 186 | 50.0 |
| Stats for ATP8 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 35.7 | 64.3 | 40 | 20 | 56 | 52 | 50.0 |
| Stats for COX1 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 43.7 | 56.3 | 380 | 299 | 496 | 379 | 50.0 |
| Stats for COX2 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 43.0 | 57.0 | 171 | 126 | 211 | 182 | 50.0 |
| Stats for COX3 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 42.1 | 57.9 | 177 | 153 | 244 | 209 | 50.0 |
| Stats for CYTB (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 43.2 | 56.8 | 293 | 200 | 355 | 294 | 50.0 |
| Stats for ND1 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 40.2 | 59.8 | 214 | 176 | 340 | 239 | 50.0 |
| Stats for ND2 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 39.1 | 60.9 | 232 | 182 | 374 | 271 | 50.0 |
| Stats for ND3 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 44.4 | 55.6 | 86 | 70 | 113 | 82 | 50.0 |
| Stats for ND4 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 42.1 | 57.9 | 338 | 247 | 418 | 386 | 50.0 |
| Stats for ND4L (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 39.1 | 60.9 | 68 | 47 | 97 | 82 | 50.0 |
| Stats for ND5 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 41.1 | 58.9 | 459 | 327 | 587 | 541 | 50.0 |
| Stats for ND6 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 38.4 | 61.6 | 113 | 78 | 104 | 203 | 50.0 |
| Stats for 12S rRNA gene (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 44.1 | 55.9 | 190 | 197 | 204 | 287 | 50.0 |
| Stats for 16S rRNA gene (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Strongylocentrotus purpuratus | 37.6 | 62.4 | 283 | 293 | 393 | 561 | 50.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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