Stats for class Sarcopterygii

Browsing orders:
Ceratodontiformes (1)
Coelacanthiformes (1)
Lepidosireniformes (2)
Species in group (4):
Latimeria chalumnae
Lepidosiren paradoxa
Neoceratodus forsteri
Protopterus annectens
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Stats for total mtDNA (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 37.2 62.8 3748 2359 5133 5163 8.3
Latimeria chalumnae 41.7 58.3 4389 2447 3920 5651 48.0
Protopterus annectens 42.0 58.0 4413 2583 4852 4809 18.0
Neoceratodus forsteri 42.8 57.2 4475 2621 4056 5420 19.7
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Stats for total protein-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 36.4 63.6 2702 1455 3746 3507 8.3
Latimeria chalumnae 41.6 58.4 3186 1550 2776 3866 48.0
Protopterus annectens 41.9 58.1 3180 1586 3447 3150 18.0
Neoceratodus forsteri 43.5 56.5 3293 1711 2826 3681 19.7
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Stats for D-loop (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 36.9 63.1 211 148 325 290 8.3
Latimeria chalumnae 34.8 65.2 145 127 246 263 48.0
Protopterus annectens 37.3 62.7 262 182 394 351 18.0
Neoceratodus forsteri 35.5 64.5 197 132 302 295 19.7
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Stats for total tRNA-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 40.8 59.2 346 278 411 494 8.3
Latimeria chalumnae 42.7 57.3 386 274 361 526 48.0
Protopterus annectens 44.4 55.6 381 302 388 466 18.0
Neoceratodus forsteri 42.4 57.6 374 282 383 507 19.7
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Stats for total rRNA-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 38.6 61.4 491 477 655 885 8.3
Latimeria chalumnae 43.5 56.5 661 491 525 971 48.0
Protopterus annectens 42.6 57.4 573 504 613 836 18.0
Neoceratodus forsteri 42.5 57.5 611 507 558 956 19.7
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Stats for ATP6 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 36.8 63.2 182 80 243 206 8.3
Latimeria chalumnae 42.4 57.6 197 83 166 215 48.0
Protopterus annectens 40.9 59.1 195 84 215 188 18.0
Neoceratodus forsteri 44.0 56.0 204 97 169 214 19.7
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Stats for ATP8 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 29.1 70.9 38 10 57 60 8.3
Latimeria chalumnae 42.9 57.1 59 13 37 59 48.0
Protopterus annectens 36.9 63.1 49 13 51 55 18.0
Neoceratodus forsteri 41.7 58.3 52 18 40 58 19.7
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Stats for COX1 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 38.9 61.1 349 255 507 443 8.3
Latimeria chalumnae 43.0 57.0 396 270 410 472 48.0
Protopterus annectens 44.6 55.4 409 281 475 383 18.0
Neoceratodus forsteri 46.4 53.6 428 294 432 403 19.7
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Stats for COX2 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 37.5 62.5 161 101 208 229 8.3
Latimeria chalumnae 41.2 58.8 176 109 172 234 48.0
Protopterus annectens 41.4 58.6 176 110 190 215 18.0
Neoceratodus forsteri 42.7 57.3 187 114 181 223 19.7
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Stats for COX3 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 39.4 60.6 207 123 264 243 8.3
Latimeria chalumnae 43.6 56.4 215 128 208 235 48.0
Protopterus annectens 44.5 55.5 217 132 236 199 18.0
Neoceratodus forsteri 46.9 53.1 226 143 194 223 19.7
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Stats for CYTB (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 38.0 62.0 292 141 368 339 8.3
Latimeria chalumnae 43.7 56.3 337 162 286 357 48.0
Protopterus annectens 42.7 57.3 337 151 355 301 18.0
Neoceratodus forsteri 43.3 56.8 339 180 309 372 19.7
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Stats for ND1 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 34.7 65.3 215 121 339 294 8.3
Latimeria chalumnae 41.6 58.4 275 129 245 323 48.0
Protopterus annectens 40.8 59.2 264 131 311 261 18.0
Neoceratodus forsteri 44.8 55.2 292 143 230 307 19.7
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Stats for ND2 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 34.3 65.7 239 115 355 323 8.3
Latimeria chalumnae 39.5 60.5 295 119 244 389 48.0
Protopterus annectens 41.0 59.0 293 130 310 299 18.0
Neoceratodus forsteri 40.1 59.9 306 113 234 391 19.7
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Stats for ND3 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 36.8 63.2 73 56 133 89 8.3
Latimeria chalumnae 43.6 56.4 101 51 92 105 48.0
Protopterus annectens 37.9 62.1 85 46 125 90 18.0
Neoceratodus forsteri 45.3 54.7 119 59 99 116 19.7
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Stats for ND4 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 33.6 66.4 306 157 467 448 8.3
Latimeria chalumnae 40.1 59.9 382 172 351 476 48.0
Protopterus annectens 40.8 59.2 391 174 442 377 18.0
Neoceratodus forsteri 42.1 57.9 385 196 346 454 19.7
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Stats for ND4L (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 42.1 57.9 88 37 97 75 8.3
Latimeria chalumnae 45.5 54.5 91 44 68 94 48.0
Protopterus annectens 46.5 53.5 88 50 87 72 18.0
Neoceratodus forsteri 44.4 55.6 85 47 77 88 19.7
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Stats for ND5 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 35.5 64.5 431 218 619 562 8.3
Latimeria chalumnae 39.4 60.6 509 215 439 673 48.0
Protopterus annectens 40.5 59.5 517 227 564 528 18.0
Neoceratodus forsteri 42.5 57.5 528 249 444 609 19.7
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Stats for ND6 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 36.5 63.5 136 50 105 219 8.3
Latimeria chalumnae 41.2 58.8 156 58 63 243 48.0
Protopterus annectens 43.9 56.1 165 60 94 194 18.0
Neoceratodus forsteri 39.7 60.3 145 60 77 234 19.7
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Stats for 12S rRNA gene (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 40.8 59.2 199 180 237 314 8.3
Latimeria chalumnae 46.2 53.8 265 189 177 352 48.0
Protopterus annectens 45.8 54.2 232 196 208 298 18.0
Neoceratodus forsteri 45.6 54.4 240 194 196 322 19.7
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Stats for 16S rRNA gene (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 37.3 62.7 292 297 418 571 8.3
Latimeria chalumnae 41.9 58.1 396 302 348 619 48.0
Protopterus annectens 40.8 59.2 341 308 405 538 18.0
Neoceratodus forsteri 40.7 59.3 371 313 362 634 19.7
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.