Stats for class Actinopterygii

Browsing orders:
Lophiiformes (1)
Mugiliformes (3)
Osmeriformes (6)
Osteoglossiformes (4)
Perciformes (59)
Percopsiformes (2)
Pleuronectiformes (6)
Polypteriformes (1)
Salmoniformes (19)
Scorpaeniformes (4)
Semionotiformes (2)
Siluriformes (4)
Zeiformes (3)
Species in group (206):
Abramis brama
Acipenser dabryanus
Acipenser gueldenstaedtii
Acipenser ruthenus
Acipenser schrenckii
Acipenser stellatus
Acipenser sturio
Acipenser transmontanus
Aldrichetta forsteri
Alepocephalus bairdii
...
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Stats for total mtDNA (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.1 - 50.6% 49.4 - 61.9% 3969 - 5373 2325 - 3654 3592 - 5915 3861 - 6092 1.0 - 118.0
Median 45.4% 54.6% 4758 2764 4355 4696 14.5
Average ± stdev 45.0 ± 2.2% 55.0 ± 2.2% 4700 ± 279 2801 ± 202 4392 ± 296 4783 ± 348 20.8 ± 21.8
Coefficient of variation 0.05 0.04 0.06 0.07 0.07 0.07 1.05
Pearson correlation
coefficient with log10MLS		 0.01 -0.01 0.17 -0.27 -0.38 0.25 -
Pearson p-value
(two tailed)		 8.61E-01 8.56E-01 1.41E-02 8.66E-05 1.38E-08 3.61E-04 -
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Stats for total protein-coding genes (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.2 - 51.9% 48.1 - 61.8% 2799 - 3849 1444 - 2412 2628 - 3785 2378 - 3813 1.0 - 118.0
Median 46.0% 54.0% 3448 1741 3130 3059 14.5
Average ± stdev 45.3 ± 2.6% 54.7 ± 2.6% 3407 ± 235 1765 ± 147 3134 ± 209 3101 ± 264 20.8 ± 21.8
Coefficient of variation 0.06 0.05 0.07 0.08 0.07 0.09 1.05
Pearson correlation
coefficient with log10MLS		 0.06 -0.06 0.23 -0.23 -0.42 0.29 -
Pearson p-value
(two tailed)		 4.18E-01 4.16E-01 9.41E-04 7.38E-04 2.02E-10 2.78E-05 -
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Stats for D-loop (group size: 168 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 23.8 - 45.8% 54.0 - 76.2% 52 - 629 31 - 329 91 - 727 97 - 783 1.0 - 118.0
Median 36.9% 63.1% 199 140 294 300 15.0
Average ± stdev 36.4 ± 3.8% 63.6 ± 3.8% 211 ± 70 143 ± 37 301 ± 79 318 ± 91 22.5 ± 23.3
Coefficient of variation 0.10 0.06 0.33 0.26 0.26 0.29 1.04
Pearson correlation
coefficient with log10MLS		 -0.17 0.17 0.12 -0.04 0.11 0.20 -
Pearson p-value
(two tailed)		 2.37E-02 2.58E-02 1.30E-01 6.15E-01 1.57E-01 7.69E-03 -
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Stats for total tRNA-coding genes (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.7 - 49.5% 50.5 - 61.3% 345 - 457 265 - 372 348 - 496 417 - 536 1.0 - 118.0
Median 45.3% 54.7% 388 313 383 469 14.5
Average ± stdev 45.0 ± 1.6% 54.9 ± 1.6% 387 ± 13 312 ± 15 382 ± 15 471 ± 18 20.8 ± 21.8
Coefficient of variation 0.04 0.03 0.03 0.05 0.04 0.04 1.05
Pearson correlation
coefficient with log10MLS		 -0.12 0.12 -0.06 -0.14 -0.00 0.16 -
Pearson p-value
(two tailed)		 8.79E-02 8.64E-02 3.96E-01 4.43E-02 9.77E-01 2.02E-02 -
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Stats for total rRNA-coding genes (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.7 - 50.5% 49.5 - 61.3% 533 - 1006 478 - 716 426 - 813 772 - 1109 1.0 - 118.0
Median 46.6% 53.4% 674 560 553 855 14.5
Average ± stdev 46.4 ± 1.9% 53.6 ± 1.9% 669 ± 53 563 ± 33 552 ± 45 869 ± 52 20.8 ± 21.8
Coefficient of variation 0.04 0.04 0.08 0.06 0.08 0.06 1.05
Pearson correlation
coefficient with log10MLS		 -0.02 0.02 0.11 -0.15 -0.20 0.24 -
Pearson p-value
(two tailed)		 7.71E-01 7.86E-01 1.19E-01 2.80E-02 3.43E-03 5.92E-04 -
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Stats for ATP6 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 34.5 - 51.8% 48.2 - 65.5% 157 - 247 71 - 125 165 - 251 141 - 230 1.0 - 118.0
Median 44.6% 55.4% 212 92 199 179 14.5
Average ± stdev 44.1 ± 3.3% 55.9 ± 3.3% 208 ± 19 92 ± 8 201 ± 15 180 ± 16 20.8 ± 21.8
Coefficient of variation 0.07 0.06 0.09 0.09 0.08 0.09 1.05
Pearson correlation
coefficient with log10MLS		 0.15 -0.15 0.23 -0.14 -0.35 0.13 -
Pearson p-value
(two tailed)		 2.69E-02 2.64E-02 7.06E-04 4.79E-02 2.91E-07 6.86E-02 -
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Stats for ATP8 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 30.4 - 50.0% 50.0 - 69.6% 37 - 67 12 - 29 32 - 57 39 - 66 1.0 - 118.0
Median 42.9% 57.6% 53 20 43 53 14.5
Average ± stdev 42.6 ± 3.7% 57.4 ± 3.7% 51 ± 5 19 ± 3 43 ± 4 53 ± 4 20.8 ± 21.8
Coefficient of variation 0.09 0.06 0.10 0.16 0.10 0.09 1.05
Pearson correlation
coefficient with log10MLS		 0.08 -0.08 0.10 0.01 -0.27 0.15 -
Pearson p-value
(two tailed)		 2.35E-01 2.35E-01 1.50E-01 8.68E-01 1.13E-04 3.05E-02 -
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Stats for COX1 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.5 - 50.0% 50.0 - 60.5% 347 - 492 251 - 349 408 - 526 326 - 464 1.0 - 118.0
Median 45.6% 54.4% 418 286 459 387 14.5
Average ± stdev 45.3 ± 2.1% 54.7 ± 2.1% 417 ± 24 287 ± 13 460 ± 22 391 ± 24 20.8 ± 21.8
Coefficient of variation 0.05 0.04 0.06 0.05 0.05 0.06 1.05
Pearson correlation
coefficient with log10MLS		 0.16 -0.16 0.25 0.02 -0.33 0.16 -
Pearson p-value
(two tailed)		 2.59E-02 2.52E-02 3.23E-04 8.02E-01 1.66E-06 1.87E-02 -
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Stats for COX2 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.8 - 50.7% 49.3 - 62.2% 160 - 221 94 - 135 161 - 218 168 - 230 1.0 - 118.0
Median 44.0% 56.2% 189 114 190 198 14.5
Average ± stdev 43.7 ± 2.0% 56.3 ± 2.0% 187 ± 11 114 ± 6 189 ± 11 199 ± 11 20.8 ± 21.8
Coefficient of variation 0.05 0.04 0.06 0.06 0.06 0.06 1.05
Pearson correlation
coefficient with log10MLS		 0.09 -0.09 0.13 -0.03 -0.38 0.27 -
Pearson p-value
(two tailed)		 2.14E-01 2.13E-01 5.90E-02 6.66E-01 2.75E-08 7.15E-05 -
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Stats for COX3 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.1 - 52.2% 47.8 - 59.9% 187 - 269 117 - 174 188 - 260 160 - 241 1.0 - 118.0
Median 47.0% 53.0% 235 134 217 198 14.5
Average ± stdev 46.7 ± 2.4% 53.3 ± 2.4% 231 ± 15 135 ± 8 218 ± 14 200 ± 14 20.8 ± 21.8
Coefficient of variation 0.05 0.04 0.07 0.06 0.07 0.07 1.05
Pearson correlation
coefficient with log10MLS		 0.05 -0.05 0.18 -0.24 -0.35 0.28 -
Pearson p-value
(two tailed)		 4.96E-01 4.92E-01 1.04E-02 6.08E-04 2.80E-07 4.86E-05 -
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Stats for CYTB (group size: 205 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.7 - 50.8% 49.2 - 62.3% 259 - 396 139 - 243 288 - 415 225 - 357 1.0 - 118.0
Median 45.9% 54.0% 342 176 330 286 14.5
Average ± stdev 45.3 ± 2.6% 54.7 ± 2.6% 339 ± 25 177 ± 15 332 ± 22 291 ± 26 20.9 ± 21.9
Coefficient of variation 0.06 0.05 0.07 0.09 0.07 0.09 1.05
Pearson correlation
coefficient with log10MLS		 0.08 -0.08 0.25 -0.24 -0.39 0.24 -
Pearson p-value
(two tailed)		 2.32E-01 2.30E-01 2.77E-04 4.55E-04 7.51E-09 5.70E-04 -
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Stats for ND1 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 53.1% 46.9 - 61.6% 232 - 356 114 - 215 212 - 345 170 - 321 1.0 - 118.0
Median 46.5% 53.5% 299 151 276 245 14.5
Average ± stdev 46.3 ± 2.8% 53.7 ± 2.8% 297 ± 21 153 ± 17 274 ± 22 249 ± 29 20.8 ± 21.8
Coefficient of variation 0.06 0.05 0.07 0.11 0.08 0.12 1.05
Pearson correlation
coefficient with log10MLS		 0.01 -0.01 0.23 -0.28 -0.42 0.31 -
Pearson p-value
(two tailed)		 9.24E-01 9.19E-01 8.80E-04 5.03E-05 4.82E-10 5.27E-06 -
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Stats for ND2 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 54.0% 46.0 - 61.6% 272 - 399 103 - 204 190 - 346 186 - 415 1.0 - 118.0
Median 46.6% 53.4% 345 140 270 283 14.5
Average ± stdev 46.4 ± 3.6% 53.6 ± 3.6% 343 ± 29 142 ± 20 267 ± 27 293 ± 40 20.8 ± 21.8
Coefficient of variation 0.08 0.07 0.09 0.15 0.10 0.14 1.05
Pearson correlation
coefficient with log10MLS		 -0.09 0.09 0.10 -0.30 -0.39 0.35 -
Pearson p-value
(two tailed)		 1.93E-01 1.93E-01 1.74E-01 1.14E-05 4.85E-09 2.81E-07 -
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Stats for ND3 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.5 - 54.4% 45.6 - 62.5% 78 - 132 43 - 72 86 - 132 54 - 104 1.0 - 118.0
Median 47.0% 53.0% 108 55 106 81 14.5
Average ± stdev 46.5 ± 3.5% 53.5 ± 3.5% 107 ± 10 55 ± 5 106 ± 8 80 ± 9 20.8 ± 21.8
Coefficient of variation 0.07 0.06 0.10 0.11 0.08 0.12 1.05
Pearson correlation
coefficient with log10MLS		 0.15 -0.15 0.22 -0.10 -0.32 0.07 -
Pearson p-value
(two tailed)		 3.26E-02 3.26E-02 1.21E-03 1.38E-01 3.30E-06 2.92E-01 -
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Stats for ND4 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.6 - 52.7% 47.3 - 62.4% 321 - 484 161 - 312 316 - 488 281 - 464 1.0 - 118.0
Median 45.6% 54.4% 414 208 379 374 14.5
Average ± stdev 45.2 ± 3.0% 54.8 ± 3.0% 413 ± 33 210 ± 21 381 ± 29 376 ± 35 20.8 ± 21.8
Coefficient of variation 0.07 0.06 0.08 0.10 0.08 0.10 1.05
Pearson correlation
coefficient with log10MLS		 0.03 -0.03 0.15 -0.18 -0.39 0.26 -
Pearson p-value
(two tailed)		 6.35E-01 6.37E-01 3.66E-02 1.12E-02 8.60E-09 1.20E-04 -
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Stats for ND4L (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 56.2% 43.8 - 61.6% 73 - 119 37 - 63 71 - 109 52 - 89 1.0 - 118.0
Median 48.5% 51.5% 97 47 83 70 14.5
Average ± stdev 48.5 ± 3.0% 51.5 ± 3.0% 96 ± 7 47 ± 4 83 ± 6 69 ± 6 20.8 ± 21.8
Coefficient of variation 0.06 0.06 0.08 0.10 0.07 0.10 1.05
Pearson correlation
coefficient with log10MLS		 0.12 -0.12 0.27 -0.23 -0.33 0.15 -
Pearson p-value
(two tailed)		 9.76E-02 9.63E-02 7.52E-05 7.73E-04 1.38E-06 3.28E-02 -
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Stats for ND5 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 36.4 - 50.4% 49.6 - 63.6% 430 - 639 204 - 368 398 - 610 398 - 657 1.0 - 118.0
Median 44.5% 55.5% 556 254 502 519 14.5
Average ± stdev 44.0 ± 2.8% 56.0 ± 2.8% 548 ± 44 260 ± 27 503 ± 38 527 ± 47 20.8 ± 21.8
Coefficient of variation 0.06 0.05 0.08 0.10 0.08 0.09 1.05
Pearson correlation
coefficient with log10MLS		 0.04 -0.04 0.24 -0.31 -0.44 0.32 -
Pearson p-value
(two tailed)		 5.98E-01 5.95E-01 4.33E-04 5.50E-06 5.71E-11 2.67E-06 -
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Stats for ND6 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 35.6 - 58.2% 41.8 - 64.4% 120 - 202 46 - 135 49 - 110 153 - 244 1.0 - 118.0
Median 46.6% 53.4% 169 72 80 199 14.5
Average ± stdev 46.3 ± 3.2% 53.7 ± 3.2% 169 ± 12 72 ± 12 80 ± 11 200 ± 16 20.8 ± 21.8
Coefficient of variation 0.07 0.06 0.08 0.17 0.14 0.08 1.05
Pearson correlation
coefficient with log10MLS		 -0.01 0.01 0.24 -0.25 -0.41 0.30 -
Pearson p-value
(two tailed)		 9.12E-01 9.12E-01 5.37E-04 2.80E-04 7.67E-10 1.39E-05 -
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Stats for 12S rRNA gene (group size: 204 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.2 - 52.2% 47.8 - 58.8% 206 - 297 176 - 236 162 - 239 256 - 329 1.0 - 118.0
Median 48.8% 51.2% 251 211 195 293 14.5
Average ± stdev 48.5 ± 1.8% 51.5 ± 1.8% 250 ± 12 211 ± 9 196 ± 11 293 ± 13 20.7 ± 21.8
Coefficient of variation 0.04 0.04 0.05 0.05 0.06 0.05 1.05
Pearson correlation
coefficient with log10MLS		 -0.00 0.00 0.16 -0.14 -0.18 0.23 -
Pearson p-value
(two tailed)		 9.48E-01 9.48E-01 1.85E-02 4.04E-02 1.03E-02 1.12E-03 -
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Stats for 16S rRNA gene (group size: 204 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.2 - 50.1% 49.9 - 62.8% 319 - 754 300 - 504 264 - 614 503 - 826 1.0 - 118.0
Median 45.5% 54.5% 420 348 355 565 14.5
Average ± stdev 45.3 ± 2.2% 54.7 ± 2.2% 419 ± 48 352 ± 27 356 ± 39 575 ± 44 20.7 ± 21.8
Coefficient of variation 0.05 0.04 0.12 0.08 0.11 0.08 1.05
Pearson correlation
coefficient with log10MLS		 -0.02 0.02 0.08 -0.14 -0.18 0.20 -
Pearson p-value
(two tailed)		 7.47E-01 7.67E-01 2.68E-01 5.33E-02 9.75E-03 3.43E-03 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.