Stats for class Actinopterygii

Browsing orders:
Acipenseriformes (10)
Amiiformes (1)
Anguilliformes (9)
Atheriniformes (1)
Beloniformes (2)
Beryciformes (1)
Characiformes (2)
Clupeiformes (14)
Cypriniformes (28)
Cyprinodontiformes (3)
Elopiformes (2)
Esociformes (2)
Gadiformes (10)
Gasterosteiformes (6)
Gonorynchiformes (1)
Species in group (206):
Abramis brama
Acipenser dabryanus
Acipenser gueldenstaedtii
Acipenser ruthenus
Acipenser schrenckii
Acipenser stellatus
Acipenser sturio
Acipenser transmontanus
Aldrichetta forsteri
Alepocephalus bairdii
...
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Stats for total mtDNA (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.1 - 50.6% 49.4 - 61.9% 3969 - 5373 2325 - 3654 3592 - 5915 3861 - 6092 1.0 - 118.0
Median 45.4% 54.6% 4758 2764 4355 4696 14.5
Average ± stdev 45.0 ± 2.2% 55.0 ± 2.2% 4700 ± 279 2801 ± 202 4392 ± 296 4783 ± 348 20.8 ± 21.8
Coefficient of variation 0.05 0.04 0.06 0.07 0.07 0.07 1.05
Pearson correlation
coefficient with log10MLS		 0.01 -0.01 0.17 -0.27 -0.38 0.25 -
Pearson p-value
(two tailed)		 8.61E-01 8.56E-01 1.41E-02 8.66E-05 1.38E-08 3.61E-04 -
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Stats for total protein-coding genes (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.2 - 51.9% 48.1 - 61.8% 2799 - 3849 1444 - 2412 2628 - 3785 2378 - 3813 1.0 - 118.0
Median 46.0% 54.0% 3448 1741 3130 3059 14.5
Average ± stdev 45.3 ± 2.6% 54.7 ± 2.6% 3407 ± 235 1765 ± 147 3134 ± 209 3101 ± 264 20.8 ± 21.8
Coefficient of variation 0.06 0.05 0.07 0.08 0.07 0.09 1.05
Pearson correlation
coefficient with log10MLS		 0.06 -0.06 0.23 -0.23 -0.42 0.29 -
Pearson p-value
(two tailed)		 4.18E-01 4.16E-01 9.41E-04 7.38E-04 2.02E-10 2.78E-05 -
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Stats for D-loop (group size: 168 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 23.8 - 45.8% 54.0 - 76.2% 52 - 629 31 - 329 91 - 727 97 - 783 1.0 - 118.0
Median 36.9% 63.1% 199 140 294 300 15.0
Average ± stdev 36.4 ± 3.8% 63.6 ± 3.8% 211 ± 70 143 ± 37 301 ± 79 318 ± 91 22.5 ± 23.3
Coefficient of variation 0.10 0.06 0.33 0.26 0.26 0.29 1.04
Pearson correlation
coefficient with log10MLS		 -0.17 0.17 0.12 -0.04 0.11 0.20 -
Pearson p-value
(two tailed)		 2.37E-02 2.58E-02 1.30E-01 6.15E-01 1.57E-01 7.69E-03 -
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Stats for total tRNA-coding genes (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.7 - 49.5% 50.5 - 61.3% 345 - 457 265 - 372 348 - 496 417 - 536 1.0 - 118.0
Median 45.3% 54.7% 388 313 383 469 14.5
Average ± stdev 45.0 ± 1.6% 54.9 ± 1.6% 387 ± 13 312 ± 15 382 ± 15 471 ± 18 20.8 ± 21.8
Coefficient of variation 0.04 0.03 0.03 0.05 0.04 0.04 1.05
Pearson correlation
coefficient with log10MLS		 -0.12 0.12 -0.06 -0.14 -0.00 0.16 -
Pearson p-value
(two tailed)		 8.79E-02 8.64E-02 3.96E-01 4.43E-02 9.77E-01 2.02E-02 -
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Stats for total rRNA-coding genes (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.7 - 50.5% 49.5 - 61.3% 533 - 1006 478 - 716 426 - 813 772 - 1109 1.0 - 118.0
Median 46.6% 53.4% 674 560 553 855 14.5
Average ± stdev 46.4 ± 1.9% 53.6 ± 1.9% 669 ± 53 563 ± 33 552 ± 45 869 ± 52 20.8 ± 21.8
Coefficient of variation 0.04 0.04 0.08 0.06 0.08 0.06 1.05
Pearson correlation
coefficient with log10MLS		 -0.02 0.02 0.11 -0.15 -0.20 0.24 -
Pearson p-value
(two tailed)		 7.71E-01 7.86E-01 1.19E-01 2.80E-02 3.43E-03 5.92E-04 -
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Stats for ATP6 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 34.5 - 51.8% 48.2 - 65.5% 157 - 247 71 - 125 165 - 251 141 - 230 1.0 - 118.0
Median 44.6% 55.4% 212 92 199 179 14.5
Average ± stdev 44.1 ± 3.3% 55.9 ± 3.3% 208 ± 19 92 ± 8 201 ± 15 180 ± 16 20.8 ± 21.8
Coefficient of variation 0.07 0.06 0.09 0.09 0.08 0.09 1.05
Pearson correlation
coefficient with log10MLS		 0.15 -0.15 0.23 -0.14 -0.35 0.13 -
Pearson p-value
(two tailed)		 2.69E-02 2.64E-02 7.06E-04 4.79E-02 2.91E-07 6.86E-02 -
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Stats for ATP8 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 30.4 - 50.0% 50.0 - 69.6% 37 - 67 12 - 29 32 - 57 39 - 66 1.0 - 118.0
Median 42.9% 57.6% 53 20 43 53 14.5
Average ± stdev 42.6 ± 3.7% 57.4 ± 3.7% 51 ± 5 19 ± 3 43 ± 4 53 ± 4 20.8 ± 21.8
Coefficient of variation 0.09 0.06 0.10 0.16 0.10 0.09 1.05
Pearson correlation
coefficient with log10MLS		 0.08 -0.08 0.10 0.01 -0.27 0.15 -
Pearson p-value
(two tailed)		 2.35E-01 2.35E-01 1.50E-01 8.68E-01 1.13E-04 3.05E-02 -
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Stats for COX1 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.5 - 50.0% 50.0 - 60.5% 347 - 492 251 - 349 408 - 526 326 - 464 1.0 - 118.0
Median 45.6% 54.4% 418 286 459 387 14.5
Average ± stdev 45.3 ± 2.1% 54.7 ± 2.1% 417 ± 24 287 ± 13 460 ± 22 391 ± 24 20.8 ± 21.8
Coefficient of variation 0.05 0.04 0.06 0.05 0.05 0.06 1.05
Pearson correlation
coefficient with log10MLS		 0.16 -0.16 0.25 0.02 -0.33 0.16 -
Pearson p-value
(two tailed)		 2.59E-02 2.52E-02 3.23E-04 8.02E-01 1.66E-06 1.87E-02 -
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Stats for COX2 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.8 - 50.7% 49.3 - 62.2% 160 - 221 94 - 135 161 - 218 168 - 230 1.0 - 118.0
Median 44.0% 56.2% 189 114 190 198 14.5
Average ± stdev 43.7 ± 2.0% 56.3 ± 2.0% 187 ± 11 114 ± 6 189 ± 11 199 ± 11 20.8 ± 21.8
Coefficient of variation 0.05 0.04 0.06 0.06 0.06 0.06 1.05
Pearson correlation
coefficient with log10MLS		 0.09 -0.09 0.13 -0.03 -0.38 0.27 -
Pearson p-value
(two tailed)		 2.14E-01 2.13E-01 5.90E-02 6.66E-01 2.75E-08 7.15E-05 -
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Stats for COX3 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.1 - 52.2% 47.8 - 59.9% 187 - 269 117 - 174 188 - 260 160 - 241 1.0 - 118.0
Median 47.0% 53.0% 235 134 217 198 14.5
Average ± stdev 46.7 ± 2.4% 53.3 ± 2.4% 231 ± 15 135 ± 8 218 ± 14 200 ± 14 20.8 ± 21.8
Coefficient of variation 0.05 0.04 0.07 0.06 0.07 0.07 1.05
Pearson correlation
coefficient with log10MLS		 0.05 -0.05 0.18 -0.24 -0.35 0.28 -
Pearson p-value
(two tailed)		 4.96E-01 4.92E-01 1.04E-02 6.08E-04 2.80E-07 4.86E-05 -
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Stats for CYTB (group size: 205 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.7 - 50.8% 49.2 - 62.3% 259 - 396 139 - 243 288 - 415 225 - 357 1.0 - 118.0
Median 45.9% 54.0% 342 176 330 286 14.5
Average ± stdev 45.3 ± 2.6% 54.7 ± 2.6% 339 ± 25 177 ± 15 332 ± 22 291 ± 26 20.9 ± 21.9
Coefficient of variation 0.06 0.05 0.07 0.09 0.07 0.09 1.05
Pearson correlation
coefficient with log10MLS		 0.08 -0.08 0.25 -0.24 -0.39 0.24 -
Pearson p-value
(two tailed)		 2.32E-01 2.30E-01 2.77E-04 4.55E-04 7.51E-09 5.70E-04 -
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Stats for ND1 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 53.1% 46.9 - 61.6% 232 - 356 114 - 215 212 - 345 170 - 321 1.0 - 118.0
Median 46.5% 53.5% 299 151 276 245 14.5
Average ± stdev 46.3 ± 2.8% 53.7 ± 2.8% 297 ± 21 153 ± 17 274 ± 22 249 ± 29 20.8 ± 21.8
Coefficient of variation 0.06 0.05 0.07 0.11 0.08 0.12 1.05
Pearson correlation
coefficient with log10MLS		 0.01 -0.01 0.23 -0.28 -0.42 0.31 -
Pearson p-value
(two tailed)		 9.24E-01 9.19E-01 8.80E-04 5.03E-05 4.82E-10 5.27E-06 -
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Stats for ND2 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 54.0% 46.0 - 61.6% 272 - 399 103 - 204 190 - 346 186 - 415 1.0 - 118.0
Median 46.6% 53.4% 345 140 270 283 14.5
Average ± stdev 46.4 ± 3.6% 53.6 ± 3.6% 343 ± 29 142 ± 20 267 ± 27 293 ± 40 20.8 ± 21.8
Coefficient of variation 0.08 0.07 0.09 0.15 0.10 0.14 1.05
Pearson correlation
coefficient with log10MLS		 -0.09 0.09 0.10 -0.30 -0.39 0.35 -
Pearson p-value
(two tailed)		 1.93E-01 1.93E-01 1.74E-01 1.14E-05 4.85E-09 2.81E-07 -
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Stats for ND3 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.5 - 54.4% 45.6 - 62.5% 78 - 132 43 - 72 86 - 132 54 - 104 1.0 - 118.0
Median 47.0% 53.0% 108 55 106 81 14.5
Average ± stdev 46.5 ± 3.5% 53.5 ± 3.5% 107 ± 10 55 ± 5 106 ± 8 80 ± 9 20.8 ± 21.8
Coefficient of variation 0.07 0.06 0.10 0.11 0.08 0.12 1.05
Pearson correlation
coefficient with log10MLS		 0.15 -0.15 0.22 -0.10 -0.32 0.07 -
Pearson p-value
(two tailed)		 3.26E-02 3.26E-02 1.21E-03 1.38E-01 3.30E-06 2.92E-01 -
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Stats for ND4 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.6 - 52.7% 47.3 - 62.4% 321 - 484 161 - 312 316 - 488 281 - 464 1.0 - 118.0
Median 45.6% 54.4% 414 208 379 374 14.5
Average ± stdev 45.2 ± 3.0% 54.8 ± 3.0% 413 ± 33 210 ± 21 381 ± 29 376 ± 35 20.8 ± 21.8
Coefficient of variation 0.07 0.06 0.08 0.10 0.08 0.10 1.05
Pearson correlation
coefficient with log10MLS		 0.03 -0.03 0.15 -0.18 -0.39 0.26 -
Pearson p-value
(two tailed)		 6.35E-01 6.37E-01 3.66E-02 1.12E-02 8.60E-09 1.20E-04 -
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Stats for ND4L (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 56.2% 43.8 - 61.6% 73 - 119 37 - 63 71 - 109 52 - 89 1.0 - 118.0
Median 48.5% 51.5% 97 47 83 70 14.5
Average ± stdev 48.5 ± 3.0% 51.5 ± 3.0% 96 ± 7 47 ± 4 83 ± 6 69 ± 6 20.8 ± 21.8
Coefficient of variation 0.06 0.06 0.08 0.10 0.07 0.10 1.05
Pearson correlation
coefficient with log10MLS		 0.12 -0.12 0.27 -0.23 -0.33 0.15 -
Pearson p-value
(two tailed)		 9.76E-02 9.63E-02 7.52E-05 7.73E-04 1.38E-06 3.28E-02 -
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Stats for ND5 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 36.4 - 50.4% 49.6 - 63.6% 430 - 639 204 - 368 398 - 610 398 - 657 1.0 - 118.0
Median 44.5% 55.5% 556 254 502 519 14.5
Average ± stdev 44.0 ± 2.8% 56.0 ± 2.8% 548 ± 44 260 ± 27 503 ± 38 527 ± 47 20.8 ± 21.8
Coefficient of variation 0.06 0.05 0.08 0.10 0.08 0.09 1.05
Pearson correlation
coefficient with log10MLS		 0.04 -0.04 0.24 -0.31 -0.44 0.32 -
Pearson p-value
(two tailed)		 5.98E-01 5.95E-01 4.33E-04 5.50E-06 5.71E-11 2.67E-06 -
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Stats for ND6 (group size: 206 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 35.6 - 58.2% 41.8 - 64.4% 120 - 202 46 - 135 49 - 110 153 - 244 1.0 - 118.0
Median 46.6% 53.4% 169 72 80 199 14.5
Average ± stdev 46.3 ± 3.2% 53.7 ± 3.2% 169 ± 12 72 ± 12 80 ± 11 200 ± 16 20.8 ± 21.8
Coefficient of variation 0.07 0.06 0.08 0.17 0.14 0.08 1.05
Pearson correlation
coefficient with log10MLS		 -0.01 0.01 0.24 -0.25 -0.41 0.30 -
Pearson p-value
(two tailed)		 9.12E-01 9.12E-01 5.37E-04 2.80E-04 7.67E-10 1.39E-05 -
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Stats for 12S rRNA gene (group size: 204 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.2 - 52.2% 47.8 - 58.8% 206 - 297 176 - 236 162 - 239 256 - 329 1.0 - 118.0
Median 48.8% 51.2% 251 211 195 293 14.5
Average ± stdev 48.5 ± 1.8% 51.5 ± 1.8% 250 ± 12 211 ± 9 196 ± 11 293 ± 13 20.7 ± 21.8
Coefficient of variation 0.04 0.04 0.05 0.05 0.06 0.05 1.05
Pearson correlation
coefficient with log10MLS		 -0.00 0.00 0.16 -0.14 -0.18 0.23 -
Pearson p-value
(two tailed)		 9.48E-01 9.48E-01 1.85E-02 4.04E-02 1.03E-02 1.12E-03 -
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Stats for 16S rRNA gene (group size: 204 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.2 - 50.1% 49.9 - 62.8% 319 - 754 300 - 504 264 - 614 503 - 826 1.0 - 118.0
Median 45.5% 54.5% 420 348 355 565 14.5
Average ± stdev 45.3 ± 2.2% 54.7 ± 2.2% 419 ± 48 352 ± 27 356 ± 39 575 ± 44 20.7 ± 21.8
Coefficient of variation 0.05 0.04 0.12 0.08 0.11 0.08 1.05
Pearson correlation
coefficient with log10MLS		 -0.02 0.02 0.08 -0.14 -0.18 0.20 -
Pearson p-value
(two tailed)		 7.47E-01 7.67E-01 2.68E-01 5.33E-02 9.75E-03 3.43E-03 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.